Atomistry » Sodium » PDB 4dy7-4egs
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Sodium in PDB, part 97 (files: 3841-3880), PDB 4dy7-4egs

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 3841-3880 (PDB 4dy7-4egs).
  1. 4dy7 (Na: 1) - Crystal Structures of Protease Nexin-1 in Complex with S195A Thrombin
    Other atoms: Ca (2);
  2. 4e05 (Na: 1) - Anophelin From the Malaria Vector Inhibits Thrombin Through A Novel Reverse-Binding Mechanism
  3. 4e06 (Na: 1) - Anophelin From the Malaria Vector Inhibits Thrombin Through A Novel Reverse-Binding Mechanism
  4. 4e0j (Na: 1) - Protelomerase Tela R255A Mutant Complexed with Dna Hairpin Product
    Other atoms: Cl (1);
  5. 4e0k (Na: 1) - Crystal Structure of the Amyloid-Fibril Forming Peptide Kdwsfy Derived From Human Beta 2 Microglobulin (58-63)
  6. 4e0s (Na: 1) - Crystal Structure of C5B-6
    Other atoms: Ca (1);
  7. 4e0t (Na: 4) - Crystal Structure of Cdpnpt in Its Unbound State
    Other atoms: Cl (12);
  8. 4e0u (Na: 1) - Crystal Structure of Cdpnpt in Complex with Thiolodiphosphate and (S)- Benzodiazependione
  9. 4e11 (Na: 1) - Crystal Structure of Kynurenine Formamidase From Drosophila Melanogaster
  10. 4e14 (Na: 1) - Crystal Structure of Kynurenine Formamidase Conjugated with Phenylmethylsulfonyl Fluoride
  11. 4e1e (Na: 1) - Crystal Structure of Trypanosome Cruzi Farnesyl Diphosphate Synthase in Complex with [2-(N-Hexylamino)Ethane-1,1-Diyl]Bisphosphonic Acid and MG2+
    Other atoms: Mg (3);
  12. 4e1j (Na: 2) - Crystal Structure of Glycerol Kinase in Complex with Glycerol From Sinorhizobium Meliloti 1021
    Other atoms: Cl (1);
  13. 4e27 (Na: 1) - Crystal Structure of A Pentameric Capsid Protein Isolated From Metagenomic Phage Sequences Solved By Iodide Sad Phasing
    Other atoms: I (28);
  14. 4e3q (Na: 4) - Pmp-Bound Form of Aminotransferase Crystal Structure From Vibrio Fluvialis
  15. 4e3r (Na: 4) - Plp-Bound Aminotransferase Mutant Crystal Structure From Vibrio Fluvialis
  16. 4e41 (Na: 2) - Structural Basis For the Recognition of Mutant Self By A Tumor- Specific, Mhc Class II-Restricted T Cell Receptor G4
  17. 4e42 (Na: 2) - Structural Basis For the Recognition of Mutant Self By A Tumor- Specific, Mhc Class II-Restricted T Cell Receptor G4
    Other atoms: Cl (9);
  18. 4e6k (Na: 6) - 2.0 A Resolution Structure of Pseudomonas Aeruginosa Bacterioferritin (Bfrb) in Complex with Bacterioferritin Associated Ferredoxin (Bfd)
    Other atoms: K (3); Fe (12);
  19. 4e6p (Na: 4) - Crystal Structure of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021
  20. 4e71 (Na: 1) - Crystal Structure of the Rho Gtpase Binding Domain of Plexin B2
  21. 4e77 (Na: 1) - 2.0A Crystal Structure of A Glutamate-1-Semialdehyde Aminotransferase From Yersinia Pestis CO92
  22. 4e7r (Na: 4) - Thrombin in Complex with 3-Amidinophenylalanine Inhibitor
    Other atoms: Cl (4);
  23. 4e96 (Na: 1) - Crystal Structure of the First Bromodomain of Human BRD4 in Complex with the Inhibitor Pfi-1
  24. 4eaa (Na: 1) - X-Ray Crystal Structure of the H141N Mutant of Perosamine N- Acetyltransferase From Caulobacter Crescentus in Complex with Coa and Gdp-Perosamine
    Other atoms: Cl (1);
  25. 4eab (Na: 1) - X-Ray Crystal Structure of the H141A Mutant of Gdp-Perosamine N-Acetyl Transferase From Caulobacter Crescentus in Complex with Coa and Gdp- Perosamine
    Other atoms: Cl (1);
  26. 4eae (Na: 2) - The Crystal Structure of A Functionally Unknown Protein From Listeria Monocytogenes Egd-E
  27. 4ecn (Na: 1) - Crystal Structure of A Leucine-Rich Repeat Protein (BT_0210) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.80 A Resolution
    Other atoms: Cl (1);
  28. 4eco (Na: 1) - Crystal Structure of A Hypothetical Protein (BACEGG_03329) From Bacteroides Eggerthii Dsm 20697 at 2.70 A Resolution
  29. 4ecz (Na: 1) - Human Dna Polymerase Eta - Dna Ternary Complex: at Crystal at pH 6.5 (Na+ Mes) with 1 CA2+ Ion
    Other atoms: Ca (1);
  30. 4ed0 (Na: 1) - Human Dna Polymerase Eta - Dna Ternary Complex: at Crystal at pH 6.8 (Na+ Mes) with 1 CA2+ Ion
    Other atoms: Ca (1);
  31. 4ed1 (Na: 1) - Human Dna Polymerase Eta - Dna Ternary Complex: at Crystal at pH 7.0 (Na+ Mes) with 1 CA2+ Ion
    Other atoms: Ca (1);
  32. 4ed2 (Na: 1) - Human Dna Polymerase Eta - Dna Ternary Complex: at Crystal at pH 7.2 (Na+ Hepes) with 1 CA2+ Ion
    Other atoms: Ca (1);
  33. 4ed3 (Na: 1) - Human Dna Polymerase Eta - Dna Ternary Complex: at Crystal at pH 7.5 (Na+ Hepes) with 1 CA2+ Ion
    Other atoms: Ca (1);
  34. 4edi (Na: 1) - Disulfide Bonded Eutl From Clostridium Perfringens
  35. 4eeb (Na: 1) - Cora Coiled-Coil Mutant Under MG2+ Absence
    Other atoms: Cs (9);
  36. 4eek (Na: 1) - Crystal Structure of Had Family Hydrolase DR_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) with Bound Phosphate and Sodium
  37. 4eel (Na: 1) - Crystal Structure of Had Family Hydrolase DR_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) with Bound Citrate and Sodium
  38. 4efc (Na: 1) - Crystal Structure of Adenylosuccinate Lyase From Trypanosoma Brucei, TB427TMP.160.5560
    Other atoms: Mg (3);
  39. 4efd (Na: 2) - Crystal Structure of An M17 Aminopeptidase From Trypanosoma Brucei, TB427TMP.02.4440
    Other atoms: Mn (8);
  40. 4egs (Na: 1) - Crystal Structure Analysis of Low Molecular Weight Protein Tyrosine Phosphatase From T. Tengcongensis
Page generated: Fri Dec 24 09:44:45 2021

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