Sodium in PDB 4eab: X-Ray Crystal Structure of the H141A Mutant of Gdp-Perosamine N-Acetyl Transferase From Caulobacter Crescentus in Complex with Coa and Gdp- Perosamine

The structure of X-Ray Crystal Structure of the H141A Mutant of Gdp-Perosamine N-Acetyl Transferase From Caulobacter Crescentus in Complex with Coa and Gdp- Perosamine, PDB code: 4eab was solved by J.B.Thoden, L.A.Reinhardt, P.D.Cook, P.Menden, W.W.Cleland, H.M.Holden, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 1.35
Space group	I 2 3
Cell size a, b, c (Å), α, β, γ (°)	114.968, 114.968, 114.968, 90.00, 90.00, 90.00
R / Rfree (%)	18.7 / 20.4

The structure of X-Ray Crystal Structure of the H141A Mutant of Gdp-Perosamine N-Acetyl Transferase From Caulobacter Crescentus in Complex with Coa and Gdp- Perosamine also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Sodium atom in the X-Ray Crystal Structure of the H141A Mutant of Gdp-Perosamine N-Acetyl Transferase From Caulobacter Crescentus in Complex with Coa and Gdp- Perosamine (pdb code 4eab). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the X-Ray Crystal Structure of the H141A Mutant of Gdp-Perosamine N-Acetyl Transferase From Caulobacter Crescentus in Complex with Coa and Gdp- Perosamine, PDB code: 4eab:

Sodium binding site 1 out of 1 in the X-Ray Crystal Structure of the H141A Mutant of Gdp-Perosamine N-Acetyl Transferase From Caulobacter Crescentus in Complex with Coa and Gdp- Perosamine


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of X-Ray Crystal Structure of the H141A Mutant of Gdp-Perosamine N-Acetyl Transferase From Caulobacter Crescentus in Complex with Coa and Gdp- Perosamine within 5.0Å range: probe atom residue distance (Å) B Occ A:Na303 b:8.8 occ:0.33 O A:HOH528 2.0 9.8 1.0 O A:HOH527 2.1 10.7 1.0 O A:HOH466 3.9 21.3 1.0 O A:HOH551 4.2 14.3 1.0 O A:GLY118 4.3 8.9 1.0 O A:GLY136 4.4 7.8 1.0 CA A:GLY136 4.8 5.8 1.0

J.B.Thoden, L.A.Reinhardt, P.D.Cook, P.Menden, W.W.Cleland, H.M.Holden. Catalytic Mechanism of Perosamine N-Acetyltransferase Revealed By High-Resolution X-Ray Crystallographic Studies and Kinetic Analyses. Biochemistry V. 51 3433 2012.
ISSN: ISSN 0006-2960
PubMed: 22443398
DOI: 10.1021/BI300197H