Atomistry » Sodium » PDB 5ccb-5cvp
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Sodium in PDB, part 139 (files: 5521-5560), PDB 5ccb-5cvp

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 5521-5560 (PDB 5ccb-5cvp).
  1. 5ccb (Na: 1) - Crystal Structure of Human M1A58 Methyltransferase in A Complex with TRNA3LYS and Sah
  2. 5ccu (Na: 1) - Crystal Structure of Endoglycoceramidase I From Rhodococ-Cus Equi
  3. 5ccx (Na: 1) - Structure of the Product Complex of Trna M1A58 Methyltransferase with TRNA3LYS As Substrate
  4. 5cd1 (Na: 2) - Structure of An Asymmetric Tetramer of Human Trna M1A58 Methyltransferase in A Complex with Sah and TRNA3LYS
  5. 5cdm (Na: 1) - 2.5A Structure of Qpt-1 with S.Aureus Dna Gyrase and Dna
    Other atoms: Mn (2);
  6. 5cdn (Na: 1) - 2.8A Structure of Etoposide with S.Aureus Dna Gyrase and Dna
    Other atoms: Mn (4);
  7. 5cdo (Na: 5) - 3.15A Structure of Qpt-1 with S.Aureus Dna Gyrase and Dna
    Other atoms: Mn (4);
  8. 5cdp (Na: 2) - 2.45A Structure of Etoposide with S.Aureus Dna Gyrase and Dna
    Other atoms: Mn (4);
  9. 5cdv (Na: 1) - Proline Dipeptidase From Deinococcus Radiodurans R1
    Other atoms: Mn (1);
  10. 5ce6 (Na: 1) - N-Terminal Domain of Fact Complex Subunit SPT16 From Cicer Arietinum (Chickpea)
    Other atoms: K (1);
  11. 5ce9 (Na: 7) - Structure of Tyrosinase From Walnut (Juglans Regia)
    Other atoms: Cu (4);
  12. 5ceg (Na: 1) - X-Ray Structure of Toxin/Anti-Toxin Complex From Mesorhizobium Opportunistum
    Other atoms: I (8);
  13. 5cfy (Na: 12) - Crystal Structure of Gltph R397A in Complex with Na+ and L-Asp
  14. 5cgi (Na: 2) - Yeast 20S Proteasome BETA5-G48C Mutant in Complex with Onx 0914
    Other atoms: Mg (8); Cl (2);
  15. 5cgm (Na: 19) - Structure of Mycobacterium Thermoresistibile Glge in Complex with Maltose at 1.95A Resolution
    Other atoms: Cl (2);
  16. 5cgx (Na: 1) - Crystal Structure of Fox-4 Cephamycinase Mutant Y150F Complexed with Cefoxitin
    Other atoms: Zn (6);
  17. 5ch7 (Na: 4) - Crystal Structure of the Perchlorate Reductase Pcrab - PHE164 Gate Switch Intermediate - From Azospira Suillum Ps
    Other atoms: Mo (3); Zn (3); Fe (57);
  18. 5chc (Na: 8) - Crystal Structure of the Perchlorate Reductase Pcrab - Substrate Analog SEO3 Bound - From Azospira Suillum Ps
    Other atoms: Mo (3); Zn (3); Fe (57);
  19. 5chm (Na: 1) - Crystal Structure of Fox-4 Cephamycinase Complexed with Ceftazidime Batsi (LP06)
    Other atoms: Zn (5);
  20. 5chs (Na: 1) - N-Terminal Domain of the Vesicular Stomatitis Virus L Protein
  21. 5ci9 (Na: 1) - Crystal Structure of Human Tob in Complex with Inhibitor Fragment 6
  22. 5ckd (Na: 1) - E. Coli Mazf E24A Form III
  23. 5ckf (Na: 1) - E. Coli Mazf E24A Form I
  24. 5ckq (Na: 1) - CUB1-Egf-CUB2 Domains of Rat Masp-1
    Other atoms: Ca (3);
  25. 5cl2 (Na: 2) - Crystal Structure of SPO0M, Sporulation Control Protein, From Bacillus Subtilis.
  26. 5clw (Na: 1) - Crystal Structure of Human Glycogen Branching Enzyme (GBE1) in Complex with Maltoheptaose
  27. 5cm6 (Na: 2) - Crystal Structure of A Trap Periplasmic Solute Binding Protein From Pseudoalteromonas Atlantica T6C(PATL_2292, Target Efi-510180) with Bound Sodium and Pyruvate
  28. 5cm7 (Na: 2) - Structure of Thiamine-Monophosphate Kinase From Acinetobacter Baumannii in Complex with Adenosine Diphosphate (Adp) and Thiamine Diphosphate (Tpp)
    Other atoms: Mg (4); Ca (6);
  29. 5cmr (Na: 3) - Crystal Structure of Linker-Mediated Zn-Bound Human H-Ferritin Variant 122H-Delta C-Star
    Other atoms: Zn (2);
  30. 5cni (Na: 2) - MGLU2 with Glutamate
    Other atoms: Cl (2);
  31. 5cnx (Na: 1) - Crystal Structure of Xaa-Pro Aminopeptidase From Escherichia Coli K12
    Other atoms: As (3); Zn (6);
  32. 5cof (Na: 1) - Crystal Structure of Uncharacterised Protein Q1R1X2 From Escherichia Coli UTI89
    Other atoms: Ca (2); Cl (1);
  33. 5com (Na: 1) - Crystal Structure of Uncharacterized Protein Q187F5 From Clostridium Difficile 630
  34. 5coq (Na: 1) - The Effect of Valine to Alanine Mutation on Inha Enzyme Crystallization Pattern and Substrate Binding Loop Conformation and Flexibility
  35. 5coz (Na: 1) - Crystal Structure of An Uncharacterized Protein (EUBREC_2869) From Eubacterium Rectale Atcc 33656 at 1.45 A Resolution
  36. 5cp0 (Na: 1) - Mas Complex Structure of Peptide Deformylase From Xanthomonas Oryzae Pv Oryzae
    Other atoms: Cd (5);
  37. 5cpd (Na: 2) - Methionine-Alanine Complex Structure of Peptide Deformylase From Xanthomonas Oryzae Pv. Oryzae
    Other atoms: Cd (3);
  38. 5cqk (Na: 1) - Crystal Structure of the Cancer Genomic Dna Mutator APOBEC3B
    Other atoms: Zn (1);
  39. 5cvk (Na: 1) - Structure of XOO1075, A Peptide Deformyase From Xanthomonas Oryzae Pv. Oryze, in Complex with Fragment 493
    Other atoms: Cd (5);
  40. 5cvp (Na: 2) - Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryzae Pv Oryze, in Complex with Fragment 571
    Other atoms: Cd (5); Cl (1);
Page generated: Tue Dec 1 10:42:23 2020

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