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Sodium in PDB 5coz: Crystal Structure of An Uncharacterized Protein (EUBREC_2869) From Eubacterium Rectale Atcc 33656 at 1.45 A Resolution

Protein crystallography data

The structure of Crystal Structure of An Uncharacterized Protein (EUBREC_2869) From Eubacterium Rectale Atcc 33656 at 1.45 A Resolution, PDB code: 5coz was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.26 / 1.45
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 47.090, 60.060, 130.480, 90.00, 90.00, 90.00
R / Rfree (%) 16.1 / 18.5

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of An Uncharacterized Protein (EUBREC_2869) From Eubacterium Rectale Atcc 33656 at 1.45 A Resolution (pdb code 5coz). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of An Uncharacterized Protein (EUBREC_2869) From Eubacterium Rectale Atcc 33656 at 1.45 A Resolution, PDB code: 5coz:

Sodium binding site 1 out of 1 in 5coz

Go back to Sodium Binding Sites List in 5coz
Sodium binding site 1 out of 1 in the Crystal Structure of An Uncharacterized Protein (EUBREC_2869) From Eubacterium Rectale Atcc 33656 at 1.45 A Resolution


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of An Uncharacterized Protein (EUBREC_2869) From Eubacterium Rectale Atcc 33656 at 1.45 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na401

b:12.4
occ:1.00
O A:HOH905 2.3 17.0 1.0
OE1 A:GLN231 2.4 12.6 1.0
OD1 A:ASP233 2.5 11.9 1.0
O A:HOH549 2.5 19.0 1.0
CD A:GLN231 3.4 12.4 1.0
CG A:ASP233 3.4 12.2 1.0
NE2 A:GLN231 3.6 10.3 1.0
OD2 A:ASP233 3.7 14.1 1.0
N A:ASP217 3.9 10.1 1.0
O A:HOH810 4.2 16.1 1.0
CB A:ASP217 4.2 12.2 1.0
CA A:ASP217 4.3 10.3 1.0
C A:ASP216 4.5 11.3 1.0
CB A:ASP233 4.7 8.2 1.0
N A:ASP233 4.8 9.9 1.0
CG A:GLN231 4.8 12.3 1.0
O A:GLN231 4.8 15.0 1.0
CA A:ASP216 4.8 9.0 1.0
O A:HOH628 5.0 23.7 1.0
OD1 A:ASP217 5.0 21.1 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Mon Oct 7 20:24:38 2024

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