Sodium in PDB 5cw2: Crystal Structure of Epoxide Hydrolase A From Mycobacterium Thermoresistibile

Enzymatic activity of Crystal Structure of Epoxide Hydrolase A From Mycobacterium Thermoresistibile

All present enzymatic activity of Crystal Structure of Epoxide Hydrolase A From Mycobacterium Thermoresistibile:
3.3.2.3;

Protein crystallography data

The structure of Crystal Structure of Epoxide Hydrolase A From Mycobacterium Thermoresistibile, PDB code: 5cw2 was solved by E.C.Schulz, M.Wilmanns, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.82 / 2.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 61.800, 105.010, 108.950, 90.00, 90.11, 90.00
R / Rfree (%) 20.9 / 25.1

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Epoxide Hydrolase A From Mycobacterium Thermoresistibile (pdb code 5cw2). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Epoxide Hydrolase A From Mycobacterium Thermoresistibile, PDB code: 5cw2:

Sodium binding site 1 out of 1 in 5cw2

Go back to Sodium Binding Sites List in 5cw2
Sodium binding site 1 out of 1 in the Crystal Structure of Epoxide Hydrolase A From Mycobacterium Thermoresistibile


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Epoxide Hydrolase A From Mycobacterium Thermoresistibile within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Na402

b:16.1
occ:1.00
O D:LEU210 2.2 26.6 1.0
O D:HOH506 2.4 21.8 1.0
HB1 D:ALA209 3.2 15.8 1.0
HB3 D:ALA209 3.3 15.8 1.0
C D:LEU210 3.4 18.7 1.0
HA D:PRO211 3.7 25.5 1.0
OD1 D:ASP212 3.7 26.5 1.0
CB D:ALA209 3.7 13.1 1.0
C D:PRO211 4.0 23.1 1.0
N D:ASP212 4.1 20.5 1.0
CA D:PRO211 4.2 21.3 1.0
N D:LEU210 4.2 13.1 1.0
CG D:ASP212 4.2 31.0 1.0
HA D:ASP212 4.2 23.4 1.0
H D:ASP212 4.2 24.6 1.0
H D:LEU210 4.3 15.8 1.0
N D:PRO211 4.3 17.7 1.0
O D:PRO211 4.3 22.3 1.0
HB2 D:ALA209 4.4 15.8 1.0
CA D:LEU210 4.4 11.1 1.0
C D:ALA209 4.5 15.7 1.0
OD2 D:ASP212 4.6 34.5 1.0
CA D:ASP212 4.6 19.5 1.0
HB2 D:LEU210 4.7 20.9 1.0
CA D:ALA209 4.7 20.7 1.0
O D:ALA209 5.0 26.9 1.0
CB D:ASP212 5.0 25.5 1.0

Reference:

E.C.Schulz, M.Wilmanns, S.Henderson, S.Southall. The Crystal Structure of Mycobacterial Epoxide Hydrolase A To Be Published.
Page generated: Tue Dec 15 10:46:55 2020

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