Sodium in PDB 5chs: N-Terminal Domain of the Vesicular Stomatitis Virus L Protein

All present enzymatic activity of N-Terminal Domain of the Vesicular Stomatitis Virus L Protein:
2.1.1.56; 2.7.7.48;

The structure of N-Terminal Domain of the Vesicular Stomatitis Virus L Protein, PDB code: 5chs was solved by T.G.Green, S.Qiu, M.Luo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	37.24 / 1.80
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	64.793, 77.237, 136.533, 90.00, 90.00, 90.00
R / Rfree (%)	17.4 / 20

The binding sites of Sodium atom in the N-Terminal Domain of the Vesicular Stomatitis Virus L Protein (pdb code 5chs). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the N-Terminal Domain of the Vesicular Stomatitis Virus L Protein, PDB code: 5chs:

Sodium binding site 1 out of 1 in the N-Terminal Domain of the Vesicular Stomatitis Virus L Protein


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of N-Terminal Domain of the Vesicular Stomatitis Virus L Protein within 5.0Å range: probe atom residue distance (Å) B Occ B:Na402 b:44.0 occ:1.00 O B:HOH501 3.0 45.8 1.0 OE1 B:GLN82 3.4 57.4 1.0 CE B:LYS220 3.8 24.8 1.0 O B:HOH595 4.0 33.8 1.0 NZ B:LYS220 4.1 32.9 1.0 CB B:GLN82 4.2 22.1 1.0 O B:GLN82 4.4 22.2 1.0 CD B:GLN82 4.5 46.4 1.0 O B:CYS81 4.7 22.9 1.0 CG B:GLN82 5.0 33.4 1.0

S.Qiu, M.Ogino, M.Luo, T.Ogino, T.J.Green. Structure and Function of the N-Terminal Domain of the Vesicular Stomatitis Virus Rna Polymerase. J.Virol. V. 90 715 2015.
ISSN: ESSN 1098-5514
PubMed: 26512087
DOI: 10.1128/JVI.02317-15