Sodium in PDB, part 80 (files: 3161-3200),
PDB 3rnx-3si4
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 3161-3200 (PDB 3rnx-3si4).
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3rnx (Na: 1) - Crystal Structure of Lysozyme in 30% Ethanol
Other atoms:
Cl (9);
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3rny (Na: 2) - Crystal Structure of Human RSK1 C-Terminal Kinase Domain
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3rrg (Na: 1) - Ternary Structure of the Large Fragment of Taq Dna Polymerase Bound to An Abasic Site and A Ddgtp
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3rrx (Na: 1) - Crystal Structure of Q683A Mutant of Exo-1,3/1,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. BB1
Other atoms:
Ca (1);
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3rt5 (Na: 8) - Lysozyme in 30% Propanol
Other atoms:
Cl (14);
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3ru5 (Na: 5) - Silver Metallated Hen Egg White Lysozyme at 1.35 A
Other atoms:
Ag (1);
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3ru7 (Na: 4) - Specific Recognition of N-Acetylated Substrates and Domain Flexibility in Wbgu: A Udp-Galnac 4-Epimerase
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3ruh (Na: 1) - Alternative Analogs As Viable Substrates of Udp-Hexose 4-Epimerases
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3rv4 (Na: 2) - Crystal Structure of E.Coli Biotin Carboxylase R16E Mutant in Complex with Mg-Adp and Bicarbonate
Other atoms:
Mg (1);
Cs (1);
Cl (2);
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3rw8 (Na: 3) - Crystal Structure of Lysozyme in 40% Ethanol
Other atoms:
Cl (9);
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3rwg (Na: 1) - Rhesus Macaque Mhc Class I Molecule Mamu-B*17-MW9
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3rwk (Na: 1) - First Crystal Structure of An Endo-Inulinase, From Aspergillus Ficuum: Structural Analysis and Comparison with Other GH32 Enzymes.
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3ry9 (Na: 1) - Crystal Structure of the Resurrected Ancestral Glucocorticoid Receptor 1 in Complex with Doc
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3s0t (Na: 1) - Crystal Structure of the Cofa Type IV Pilin Subunit From Enterotoxigenic E. Coli
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3s18 (Na: 1) - Crystal Structure of A Plant Albumin From Cicer Arietinum Showing Hemagglutination
Other atoms:
I (2);
Ca (2);
Cl (3);
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3s30 (Na: 2) - Crystal Structure of A Hypothetical Glycoside Hydrolase (BVU_0247) From Bacteroides Vulgatus at 2.46 A Resolution
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3s3y (Na: 2) - Crystal Structure An Tandem Cyanovirin-N Dimer, CVN2L0
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3s3z (Na: 2) - Crystal Structure An Tandem Cyanovirin-N Dimer, CVN2L10
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3s41 (Na: 1) - Glucokinase in Complex with Activator and Glucose
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3s45 (Na: 1) - Wild-Type Hiv-2 Protease with Antiviral Drug Amprenavir
Other atoms:
Cl (8);
Zn (7);
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3s54 (Na: 1) - Hiv-1 Protease Triple Mutants V32I, I47V, V82I with Antiviral Drug Darunavir in Space Group P21212
Other atoms:
Cl (2);
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3s5n (Na: 1) - Crystal Structure of Human 4-Hydroxy-2-Oxoglutarate Aldolase
Other atoms:
K (1);
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3s6d (Na: 1) - Crystal Structure of A Putative Triosephosphate Isomerase From Coccidioides Immitis
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3s6i (Na: 2) - Schizosaccaromyces Pombe 3-Methyladenine Dna Glycosylase (MAG1) in Complex with Abasic-Dna.
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3s7x (Na: 5) - Unassembled Washington University Polyomavirus VP1 Pentamer R198K Mutant
Other atoms:
Cl (5);
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3s8o (Na: 1) - Crystal Structure of the GRB2 SH2 Domain in Complex with A Pyxn- Derived Tripeptide
Other atoms:
Cl (1);
-
3s95 (Na: 2) - Crystal Structure of the Human LIMK1 Kinase Domain in Complex with Staurosporine
Other atoms:
Cl (2);
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3s9e (Na: 3) - Crystal Structure of the Kainate Receptor GLUK3 Ligand Binding Domain in Complex with (S)-Glutamate
Other atoms:
Cl (4);
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3s9j (Na: 3) - Crystal Structure of A Member of DUF4221 Family (BVU_1028) From Bacteroides Vulgatus at 1.75 A Resolution
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3s9o (Na: 2) - The Focal Adhesion Targeting (Fat) Domain of the Focal Adhesion Kinase Showing N-Terminal Interactions in Cis
Other atoms:
Cl (1);
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3sce (Na: 2) - Structure of the Thioalkalivibrio Nitratireducens Cytochrome C Nitrite Reductase with A Covalent Bond Between the CE1 Atom of TYR303 and the Cg Atom of GLN360 (Tvnirb)
Other atoms:
Fe (16);
Ca (4);
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3scy (Na: 1) - Crystal Structure of A Hypothetical Bacterial 6- Phosphogluconolactonase (BF1038) From Bacteroides Fragilis Nctc 9343 at 1.50 A Resolution
Other atoms:
Mg (2);
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3sd7 (Na: 1) - 1.7 Angstrom Resolution Crystal Structure of Putative Phosphatase From Clostridium Difficile
Other atoms:
Cl (1);
-
3see (Na: 1) - Crystal Structure of A Hypothetical Sugar Binding Protein (BT_4411) From Bacteroides Thetaiotaomicron Vpi-5482 at 1.25 A Resolution
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3sep (Na: 14) - E. Coli (Lacz) Beta-Galactosidase (S796A)
Other atoms:
Mg (9);
-
3sha (Na: 2) - Human Thrombin in Complex with UBTHR97
Other atoms:
Cl (1);
-
3shc (Na: 2) - Human Thrombin in Complex with UBTHR101
Other atoms:
Cl (1);
-
3shx (Na: 1) - Frog M-Ferritin with Magnesium, L134P Mutant
Other atoms:
Mg (10);
Cl (7);
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3si3 (Na: 2) - Human Thrombin in Complex with UBTHR103
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3si4 (Na: 2) - Human Thrombin in Complex with UBTHR104
Page generated: Thu Dec 28 11:17:19 2023
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