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Sodium in PDB 3ruh: Alternative Analogs As Viable Substrates of Udp-Hexose 4-Epimerases

Protein crystallography data

The structure of Alternative Analogs As Viable Substrates of Udp-Hexose 4-Epimerases, PDB code: 3ruh was solved by V.S.Bhatt, W.Guan, P.G.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 73.53 / 2.88
Space group P 32
Cell size a, b, c (Å), α, β, γ (°) 76.612, 76.612, 220.600, 90.00, 90.00, 120.00
R / Rfree (%) 21 / 26.8

Sodium Binding Sites:

The binding sites of Sodium atom in the Alternative Analogs As Viable Substrates of Udp-Hexose 4-Epimerases (pdb code 3ruh). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Alternative Analogs As Viable Substrates of Udp-Hexose 4-Epimerases, PDB code: 3ruh:

Sodium binding site 1 out of 1 in 3ruh

Go back to Sodium Binding Sites List in 3ruh
Sodium binding site 1 out of 1 in the Alternative Analogs As Viable Substrates of Udp-Hexose 4-Epimerases


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Alternative Analogs As Viable Substrates of Udp-Hexose 4-Epimerases within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na348

b:22.2
occ:1.00
N A:LYS187 3.9 24.9 1.0
O A:GLN135 4.1 26.5 1.0
O A:LYS187 4.1 23.1 1.0
O A:GLY185 4.3 28.5 1.0
CD1 A:PHE186 4.4 22.7 1.0
CA A:PHE186 4.6 25.4 1.0
CB A:LYS187 4.6 25.9 1.0
O A:VAL134 4.6 26.3 1.0
CA A:LYS187 4.7 24.6 1.0
C A:PHE186 4.7 24.6 1.0
NZ A:LYS257 4.7 27.2 1.0
CE1 A:PHE186 4.8 21.8 1.0
C A:LYS187 4.8 23.2 1.0
OD2 A:ASP254 4.9 33.7 1.0
C A:GLN135 5.0 25.7 1.0

Reference:

V.S.Bhatt, W.Guan, P.G.Wang. Alternative Analogs As Viable Substrates of Udp-Hexose 4-Epimerases To Be Published.
Page generated: Tue Dec 15 06:24:12 2020

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