Sodium in PDB, part 121 (files: 4801-4840),
PDB 4q3d-4qom
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 4801-4840 (PDB 4q3d-4qom).
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4q3d (Na: 4) - Pyld Cocrystallized with L-Ornithine-Nd-D-Ornithine and Nad+
Other atoms:
Mg (4);
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4q3e (Na: 2) - Pyld Cocrystallized with L-Ornithine-Nd-D-Lysine and Nad+
Other atoms:
Mg (2);
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4q3m (Na: 1) - Crystal Structure of Mgs-M4, An Aldo-Keto Reductase Enzyme From A Medee Basin Deep-Sea Metagenome Library
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4q3n (Na: 1) - Crystal Structure of Mgs-M5, A Lactate Dehydrogenase Enzyme From A Medee Basin Deep-Sea Metagenome Library
Other atoms:
Cl (2);
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4q4b (Na: 2) - Crystal Structure of Limp-2 (Space Group C2221)
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4q4e (Na: 1) - Crystal Structure of E.Coli Aminopeptidase N in Complex with Actinonin
Other atoms:
Zn (1);
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4q4i (Na: 3) - Crystal Structure of E.Coli Aminopeptidase N in Complex with Amastatin
Other atoms:
Zn (1);
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4q4l (Na: 1) - Crystal Structure of An Atp Synthase Subunit Beta 1 (F1-B1) From Burkholderia Thailandensis
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4q4x (Na: 1) - Crystal Structure of Coxsackievirus A24V Soaked with 6'-Sialyllactose (6SL)
Other atoms:
Cl (5);
Ca (5);
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4q53 (Na: 1) - Crystal Structure of A Hypothetical Protein (BACUNI_04292) From Bacteroides Uniformis Atcc 8492 at 1.27 A Resolution
Other atoms:
I (11);
Cl (9);
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4q56 (Na: 1) - Structure of Helix Aspersa Agglutinin with Natural Glycosylation and N-Acetyl-Alpha-D-Galactosamine (Galnac)
Other atoms:
Zn (1);
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4q5k (Na: 1) - Crystal Structure of A Hypothetical Protein (BACUNI_02947) From Bacteroides Uniformis Atcc 8492 at 1.30 A Resolution
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4q68 (Na: 3) - Crystal Structure of A Hypothetical Protein (BACUNI_02947) From Bacteroides Uniformis Atcc 8492 at 1.07 A Resolution
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4q69 (Na: 2) - Crystal Structure of A Susd Homolog (BT2259) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.50 A Resolution
Other atoms:
Cl (1);
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4q7w (Na: 1) - Crystal Structure of 1-Hydroxy-6-Methylpyridine-2(1H)-Thione Bound to Human Carbonic Anhydrase II
Other atoms:
Hg (1);
Zn (1);
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4q92 (Na: 6) - 1.90 Angstrom Resolution Crystal Structure of Apo Betaine Aldehyde Dehydrogenase (Betb) G234S Mutant From Staphylococcus Aureus (IDP00699) with Bme-Modified CYS289
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4q98 (Na: 1) - Crystal Structure of A Fimbrilin (Fima) From Porphyromonas Gingivalis W83 at 1.30 A Resolution (Psi Community Target, Nakayama)
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4q9c (Na: 1) - Ignar Antibody Domain C3
Other atoms:
Cl (2);
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4q9z (Na: 1) - Human Protein Kinase C Theta in Complex with COMPOUND35 ((1R)-9- (Azetidin-3-Ylamino)-1,8-Dimethyl-3,5-Dihydro[1,2,4]Triazino[3,4- C][1,4]Benzoxazin-2(1H)-One)
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4qc4 (Na: 1) - Crystal Structure of C117S Mutant of Human Acidic Fibroblast Growth Factor
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4qce (Na: 2) - Crystal Structure of Recombinant Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27
Other atoms:
Mg (2);
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4qcf (Na: 1) - Crystal Structure of N-Terminal Mutant (V1A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27
Other atoms:
Mg (1);
Cl (3);
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4qdm (Na: 2) - Crystal Structure of N-Terminal Mutant (V1L) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27
Other atoms:
Mg (2);
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4qet (Na: 8) - Structure of Aldehyde Dehydrogenase From Bacillus Cereus, G224D Mutant
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4qf6 (Na: 24) - Structure of Aldehyde Dehydrogenase From Bacillus Cereus, E194S Mutant
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4qfd (Na: 2) - Co-Crystal Structure of Compound 2 (3-(7-Hydroxy-2-Oxo-4-Phenyl-2H- Chromen-6-Yl)Propanoic Acid) and Fad Bound to Human Daao at 2.85A
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4qfe (Na: 4) - Crystal Structure of An Enoyl-Coa Hydratase From Mycobacterium Smegmatis
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4qfm (Na: 1) - The Structure of AIF2GAMMA Subunit D152A From Archaeon Sulfolobus Solfataricus Complexed with Gdpcp
Other atoms:
Mg (1);
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4qgp (Na: 2) - Crystal Structure of A Pyrophosphatase (AF1178) From Archaeoglobus Fulgidus Dsm 4304 at 1.80 A Resolution
Other atoms:
Mg (2);
Cl (1);
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4qh1 (Na: 1) - The Glic Pentameric Ligand-Gated Ion Channel (Wild-Type) in Complex with Bromoacetate
Other atoms:
Br (15);
-
4qh4 (Na: 1) - The Glic Pentameric Ligand-Gated Ion Channel (Wild-Type) Crystallized in Acetate Buffer at PH3
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4qh5 (Na: 4) - The Glic Pentameric Ligand-Gated Ion Channel (Wild-Type) Crystallized in Phosphate Buffer
Other atoms:
Cl (5);
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4qhh (Na: 1) - Crystal Structure of Methanocaldococcus Jannaschii Tetrameric Selecase
Other atoms:
Zn (1);
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4qje (Na: 8) - 1.85 Angstrom Resolution Crystal Structure of Apo Betaine Aldehyde Dehydrogenase (Betb) G234S Mutant From Staphylococcus Aureus (IDP00699) with Bme-Free Sulfinic Acid Form of CYS289
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4qku (Na: 4) - Crystal Structure of A Putative Hydrolase From Burkholderia Cenocepacia
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4qkx (Na: 2) - Structure of BETA2 Adrenoceptor Bound to A Covalent Agonist and An Engineered Nanobody
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4qm6 (Na: 5) - Structure of Bacterial Polynucleotide Kinase Bound to Gtp and Rna
Other atoms:
Mg (2);
-
4qnk (Na: 8) - The Structure of Wt A. Thaliana IGPD2 in Complex with MN2+ and Phosphate
Other atoms:
Mn (16);
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4qol (Na: 2) - Structure of Bacillus Pumilus Catalase
Other atoms:
Fe (8);
Cl (6);
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4qom (Na: 2) - Bacillus Pumilus Catalase with Pyrogallol Bound
Other atoms:
Fe (8);
Cl (6);
Page generated: Thu Dec 28 11:20:25 2023
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