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Sodium in PDB 4q4l: Crystal Structure of An Atp Synthase Subunit Beta 1 (F1-B1) From Burkholderia Thailandensis

Enzymatic activity of Crystal Structure of An Atp Synthase Subunit Beta 1 (F1-B1) From Burkholderia Thailandensis

All present enzymatic activity of Crystal Structure of An Atp Synthase Subunit Beta 1 (F1-B1) From Burkholderia Thailandensis:
3.6.3.14;

Protein crystallography data

The structure of Crystal Structure of An Atp Synthase Subunit Beta 1 (F1-B1) From Burkholderia Thailandensis, PDB code: 4q4l was solved by Seattle Structural Genomics Center For Infectious Disease, Seattlestructural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.420, 97.990, 127.540, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 23.6

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of An Atp Synthase Subunit Beta 1 (F1-B1) From Burkholderia Thailandensis (pdb code 4q4l). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of An Atp Synthase Subunit Beta 1 (F1-B1) From Burkholderia Thailandensis, PDB code: 4q4l:

Sodium binding site 1 out of 1 in 4q4l

Go back to Sodium Binding Sites List in 4q4l
Sodium binding site 1 out of 1 in the Crystal Structure of An Atp Synthase Subunit Beta 1 (F1-B1) From Burkholderia Thailandensis


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of An Atp Synthase Subunit Beta 1 (F1-B1) From Burkholderia Thailandensis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na501

b:53.0
occ:1.00
 O A:HOH607 2.3 49.6 1.0
O A:ASP453 2.4 39.8 1.0
O A:HOH640 2.4 40.3 1.0
O A:HOH661 2.5 41.0 1.0
O A:HOH628 2.7 43.7 1.0
C A:ASP453 3.6 39.5 1.0
NZ A:LYS412 4.0 41.8 1.0
O A:HOH639 4.1 50.0 1.0
O A:HOH649 4.3 37.6 1.0
CA A:ASP453 4.4 38.4 1.0
N A:HIS454 4.6 40.1 1.0
CB A:ASP453 4.7 39.4 1.0
CA A:HIS454 4.7 42.9 1.0

Reference:

T.E.Edwards, J.Abendroth, Seattle Structural Genomics Center For Infectious Disease. Crystal Structure of An Atp Synthase Subunit Beta 1 (F1-B1) From Burkholderia Thailandensis To Be Published.
Page generated: Sun Aug 17 21:22:20 2025

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