Sodium in PDB, part 294 (files: 11721-11760),
PDB 8zj7-9fij
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 11721-11760 (PDB 8zj7-9fij).
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8zj7 (Na: 1) - Terephthalate 1,2-Cis-Dihydrodioldehydrogenase/Decarboxylase in Complex with 3,4-Dihydroxybenzoate and Nad.
Other atoms:
Cl (1);
Zn (4);
Mg (1);
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8zmn (Na: 1) - Crystal Structure of ANTXR1
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8zmu (Na: 1) - Glutamate Dehydrogenase (W89F-Mutant) From Thermococcus Profundus in the Unliganded State
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8zpb (Na: 2) - Cryo-Em Structure of Human Norepinephrine Transporter Net Bound with Norepinephrine in An Occluded State at A Resolution of 2.6 Angstrom
Other atoms:
Cl (1);
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9avk (Na: 1) - Structure of Long Rib Domain From Limosilactobacillus Reuteri
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9b1u (Na: 2) - Crystal Structure of Pqqt with Pqq Bound
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9b1z (Na: 2) - Crystal Structure of Adp-Ribose Diphosphatase From Klebsiella Pneumoniae (Apo)
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9b74 (Na: 7) - Crystal Structure of Humanized 44H10 Fab Version 14
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9b7c (Na: 1) - High-Resolution Ambient Temperature Structure of Lysozyme Soaked with Sodium Iodide
Other atoms:
I (3);
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9b7e (Na: 4) - S_SAD Structure of Hewl Using Lossy Compression Data with A Compression Ratio of 422
Other atoms:
Cl (8);
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9b7f (Na: 4) - S_SAD Structure of Hewl Using Lossless Default Compression
Other atoms:
Cl (8);
-
9b8u (Na: 2) - Crystal Structure of Crx-RET4 Oligonucleotide Complex
Other atoms:
As (2);
K (3);
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9bcz (Na: 1) - Chicken 1-Phosphatidylinositol 4,5-Bisphosphate Phosphodiesterase Zeta-1 (PLCZ1) in Complex with Calcium and Phosphorylated Threonine
Other atoms:
Cl (2);
Ca (1);
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9bnh (Na: 2) - X-Ray Crystal Structure of Cu-TZ4H Tryptophan Zipper Metallo-Peptide
Other atoms:
Cu (2);
-
9cip (Na: 7) - Microed Structure of the C11 Cysteine Protease Clostripain
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9crn (Na: 1) - Crystal Structure of Streptococcus Pyogenes Tgla
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9end (Na: 2) - Crystal Structure of Methanopyrus Kandleri Malate Dehydrogenase Mutant 3
Other atoms:
Cl (1);
-
9ent (Na: 3) - Ssx Structure of Autotaxin in Cryogenic Conditions
Other atoms:
Zn (2);
Ca (1);
I (15);
-
9eo4 (Na: 1) - Outward-Open Structure of Human Dopamine Transporter Bound to Cocaine
Other atoms:
Cl (1);
-
9epl (Na: 1) - Mpro From Sars-Cov-2 with 298Q Mutation
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9eqh (Na: 1) - WWP2 WW2-2,3-Linker-Hect (WWP2-Lh)
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9etn (Na: 1) - Crystal Structure of Murine CRTAC1
Other atoms:
Ca (6);
K (3);
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9eu5 (Na: 2) - Ssx Structure of Autotaxin at Room Temperature
Other atoms:
I (15);
Zn (9);
Ca (1);
-
9eup (Na: 2) - Inhibitor-Free Outward-Open Structure of Drosophila Dopamine Transporter
Other atoms:
Cl (1);
-
9f8x (Na: 3) - Low-Dose Structure of Marinobacter Nauticus Nitrous Oxide Reductase
Other atoms:
Ca (8);
Cl (4);
Cu (24);
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9fcf (Na: 1) - Medicago Truncatula 5'-Profar Isomerase (HISN3) D57N Mutant in Complex with Profar
Other atoms:
Cl (1);
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9fcg (Na: 2) - Medicago Truncatula 5'-Profar Isomerase (HISN3) D57N Mutant in Complex with Prfar
Other atoms:
Cl (2);
-
9fcq (Na: 1) - Cysg(N-16)-H122A Mutant in Complex with Sah From Kitasatospora Cystarginea
Other atoms:
Ca (1);
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9fdj (Na: 8) - Crystal Structure of the Nuoef Variant R66G (Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions (Short Soak)
Other atoms:
Cl (4);
Fe (12);
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9fdk (Na: 7) - Crystal Structure of Oxidized Nuoef Variant R66G(Nuof) From Aquifex Aeolicus
Other atoms:
Cl (3);
Fe (12);
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9fdv (Na: 16) - Crystal Structure of Reduced Nuoef Variant R66G(Nuof) From Aquifex Aeolicus
Other atoms:
Fe (12);
Cl (3);
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9fe0 (Na: 9) - Crystal Structure of Reduced Nuoef Variant R66G(Nuof) From Aquifex Aeolicus Bound to Nad+
Other atoms:
Fe (12);
Cl (6);
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9fe5 (Na: 6) - Crystal Structure of Nuoef Variant R66G(Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions After 10 Min Soaking
Other atoms:
Fe (12);
Cl (2);
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9fe7 (Na: 11) - Crystal Structure of Oxidized Nuoef Variant P228R(Nuof) From Aquifex Aeolicus
Other atoms:
Fe (12);
Cl (3);
-
9fe8 (Na: 8) - Crystal Structure of Reduced Nuoef Variant P228R(Nuof) From Aquifex Aeolicus
Other atoms:
Fe (12);
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9fea (Na: 14) - Crystal Structure of Reduced Nuoef Variant P228R(Nuof) From Aquifex Aeolicus Bound to Nad+
Other atoms:
Fe (12);
Cl (2);
-
9fif (Na: 7) - Crystal Structure of Nuoef Variant P228R(Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions
Other atoms:
Fe (12);
-
9fih (Na: 10) - Crystal Structure of Nuoef Variant P228R(Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions After 10 Min Soaking
Other atoms:
Fe (12);
-
9fii (Na: 9) - Crystal Structure of Oxidized Nuoef Variant E222K(Nuof) From Aquifex Aeolicus
Other atoms:
Cl (5);
Fe (12);
-
9fij (Na: 15) - Crystal Structure of Reduced Nuoef Variant E222K(Nuof) From Aquifex Aeolicus
Other atoms:
Fe (12);
Cl (7);
Page generated: Wed Oct 9 14:27:27 2024
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