Atomistry » Sodium » PDB 7q78-7r3s
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Sodium in PDB, part 255 (files: 10161-10200), PDB 7q78-7r3s

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 10161-10200 (PDB 7q78-7r3s).
  1. 7q78 (Na: 1) - Room Temperature Structure of Rnase A at 72 Mpa Helium Gas Pressure in A Sapphire Capillary
    Other atoms: Cl (3);
  2. 7q79 (Na: 1) - Room Temperature Structure of Rnase A at 100 Mpa Helium Gas Pressure in A Sapphire Capillary
    Other atoms: Cl (3);
  3. 7q7a (Na: 1) - Room Temperature Structure of Rnase A at 120 Mpa Helium Gas Pressure in A Sapphire Capillary
    Other atoms: Cl (3);
  4. 7q7b (Na: 1) - Room Temperature Structure of Rnase A at Atmospheric Pressure in A Sapphire Capillary After High Helium Gas Pressure Release
    Other atoms: Cl (3);
  5. 7q80 (Na: 1) - Crystal Structure of the Methyltransferase-Ribozyme 1, No Magnesium Condition (with 1-Methyl-Adenosine)
  6. 7q89 (Na: 8) - Olep Mutant G92W in Complex with 6DEB
    Other atoms: Fe (6);
  7. 7q9l (Na: 1) - Transthyretin Complexed with (E)-4-(2-(Naphthalen-1-Yl)Vinyl)Benzene- 1,2-Diol
  8. 7q9o (Na: 1) - Complex of Transthyretin with Resveratrol Exhibits Multiple Binding Modes
  9. 7qbs (Na: 1) - B12-Dependent Radical Sam Methyltransferase, MMP10 with [4FE-4S] Cluster, Cobalamin, S-Adenosyl-L-Methionine, and Peptide Bound.
    Other atoms: Fe (5); Co (1);
  10. 7qbt (Na: 4) - B12-Dependent Radical Sam Methyltransferase, MMP10 with [4FE-4S] Cluster, Cobalamin, and S-Methyl-5'-Thioadenosine Bound.
    Other atoms: Co (4); Fe (20);
  11. 7qbu (Na: 2) - B12-Dependent Radical Sam Methyltransferase, MMP10 with [4FE-4S] Cluster, Cobalamin, and S-Methyl-5'-Thioadenosine Bound.
    Other atoms: Fe (10); Co (2);
  12. 7qbv (Na: 4) - B12-Dependent Radical Sam Methyltransferase, MMP10 with [4FE-4S] Cluster, Cobalamin, and S-Adenosyl-L-Homocysteine Bound.
    Other atoms: Co (4); Fe (20);
  13. 7qdj (Na: 2) - Racemic Structure of Pk-10 and Pk-11
  14. 7qdk (Na: 3) - A Trimeric De Novo Coiled-Coil Assembly: Cc-Typen-Lald
    Other atoms: Br (3);
  15. 7qdn (Na: 6) - Structure of Human Liver Pyruvate Kinase From Which the B Domain Has Been Deleted
    Other atoms: K (8); Mg (8);
  16. 7qdq (Na: 2) - Crystal Structure of HDM2 in Complex with Caylin-1
    Other atoms: Cl (11);
  17. 7qf0 (Na: 1) - Crystal Structure of the Sars-Cov-2 Rbd in Complex with the Human Antibody CV2.2325
    Other atoms: Cl (3);
  18. 7qf7 (Na: 1) - Orthorhombic Crystal Structure of Ptg CBM21 in Complex with Beta- Cyclodextrin
  19. 7qh0 (Na: 1) - Apo Structure of the Leishmania Mexicana Triose-Phosphate Isomerase (Lmtim), N11A-E65Q Variant, Open Conformation
    Other atoms: Cl (2);
  20. 7qha (Na: 2) - Cryo-Em Structure of the Tripartite Atp-Independent Periplasmic (Trap) Transporter Siaqm From Photobacterium Profundum in Amphipol
  21. 7qhp (Na: 2) - Structure of I-AG7 with A Bound Hybrid Insulin Peptide
  22. 7qkb (Na: 4) - Crystal Structure of Human Cathepsin L in Complex with Covalently Bound GC376
    Other atoms: Cl (1);
  23. 7qlh (Na: 1) - Crystal Structure of S-Layer Protein Slpa From Lactobacillus Amylovorus, Domain I (Aa 48-213)
  24. 7qny (Na: 1) - The Receptor Binding Domain of Sars-Cov-2 Spike Glycoprotein in Complex with Covox-58 and Covox-158 Fabs
  25. 7qoa (Na: 2) - Structure of Codb, A Cytosine Transporter in An Outward-Facing Conformation
  26. 7qq1 (Na: 1) - X-Ray Structure of the Adduct Obtained Upon Reaction of [Cis- RH2(OCOCH3)2(OCOCF3)2] with Hewl
    Other atoms: Rh (3);
  27. 7qta (Na: 1) - S1 Nuclease From Aspergillus Oryzae in Complex with Uridine
    Other atoms: Zn (6);
  28. 7qtd (Na: 2) - Crystal Structure of the Fe(II)/Alpha-Ketoglutarate Dependent Dioxygenase PLAO1 in Complex with Iron and Alpha-Ketoglutarate
    Other atoms: Fe (4);
  29. 7qte (Na: 3) - Crystal Structure of the Fe(II)/Alpha-Ketoglutarate Dependent Dioxygenase PLAO1 in Complex with Cobalt and Succinate
    Other atoms: Co (3);
  30. 7qtf (Na: 4) - Crystal Structure of the Fe(II)/Alpha-Ketoglutarate Dependent Dioxygenase PLAO1 in Complex with Sodium Succinate
  31. 7qua (Na: 2) - Duplex Rna Containing Xanthosine-Cytosine Base Pairs
    Other atoms: Mg (2);
  32. 7quv (Na: 1) - Crystal Structure of Human Calprotectin (S100A8/S100A9) in Complex with Peptide 3
    Other atoms: Ni (1); K (1); Ca (3);
  33. 7qxy (Na: 4) - X-Ray Structure of Furin in Complex with the Dichlorophenylpyridine- Based Inhibitor 3
    Other atoms: Cl (3); Ca (3);
  34. 7qxz (Na: 2) - X-Ray Structure of Furin in Complex with the Dichlorophenylpyridine- Based Inhibitor 5
    Other atoms: Ca (3); Cl (3);
  35. 7qy0 (Na: 4) - X-Ray Structure of Furin in Complex with the Dichlorophenylpyridine- Based Inhibitor 1
    Other atoms: Cl (3); Ca (3);
  36. 7qy1 (Na: 4) - X-Ray Structure of Furin in Complex with the Dichlorophenylpyridine- Based Inhibitor 4
    Other atoms: Cl (3); Ca (3);
  37. 7qy2 (Na: 4) - X-Ray Structure of Furin in Complex with the Dichlorophenylpyridine- Based Inhibitor 2
    Other atoms: Ca (3); Cl (3);
  38. 7qz1 (Na: 4) - Formate Dehydrogenase From Starkeya Novella
    Other atoms: Cl (2);
  39. 7qzq (Na: 1) - Crystal Structure of the Kelch Domain of Human KBTBD12
  40. 7r3s (Na: 2) - Ftra/P19 of Rubrivivax Gelatinosus in Complex with Ni
    Other atoms: Ni (1);
Page generated: Wed Nov 13 13:06:58 2024

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