Sodium in PDB, part 255 (files: 10161-10200),
PDB 7q78-7r3s
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 10161-10200 (PDB 7q78-7r3s).
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7q78 (Na: 1) - Room Temperature Structure of Rnase A at 72 Mpa Helium Gas Pressure in A Sapphire Capillary
Other atoms:
Cl (3);
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7q79 (Na: 1) - Room Temperature Structure of Rnase A at 100 Mpa Helium Gas Pressure in A Sapphire Capillary
Other atoms:
Cl (3);
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7q7a (Na: 1) - Room Temperature Structure of Rnase A at 120 Mpa Helium Gas Pressure in A Sapphire Capillary
Other atoms:
Cl (3);
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7q7b (Na: 1) - Room Temperature Structure of Rnase A at Atmospheric Pressure in A Sapphire Capillary After High Helium Gas Pressure Release
Other atoms:
Cl (3);
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7q80 (Na: 1) - Crystal Structure of the Methyltransferase-Ribozyme 1, No Magnesium Condition (with 1-Methyl-Adenosine)
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7q89 (Na: 8) - Olep Mutant G92W in Complex with 6DEB
Other atoms:
Fe (6);
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7q9l (Na: 1) - Transthyretin Complexed with (E)-4-(2-(Naphthalen-1-Yl)Vinyl)Benzene- 1,2-Diol
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7q9o (Na: 1) - Complex of Transthyretin with Resveratrol Exhibits Multiple Binding Modes
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7qbs (Na: 1) - B12-Dependent Radical Sam Methyltransferase, MMP10 with [4FE-4S] Cluster, Cobalamin, S-Adenosyl-L-Methionine, and Peptide Bound.
Other atoms:
Fe (5);
Co (1);
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7qbt (Na: 4) - B12-Dependent Radical Sam Methyltransferase, MMP10 with [4FE-4S] Cluster, Cobalamin, and S-Methyl-5'-Thioadenosine Bound.
Other atoms:
Co (4);
Fe (20);
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7qbu (Na: 2) - B12-Dependent Radical Sam Methyltransferase, MMP10 with [4FE-4S] Cluster, Cobalamin, and S-Methyl-5'-Thioadenosine Bound.
Other atoms:
Fe (10);
Co (2);
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7qbv (Na: 4) - B12-Dependent Radical Sam Methyltransferase, MMP10 with [4FE-4S] Cluster, Cobalamin, and S-Adenosyl-L-Homocysteine Bound.
Other atoms:
Co (4);
Fe (20);
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7qdj (Na: 2) - Racemic Structure of Pk-10 and Pk-11
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7qdk (Na: 3) - A Trimeric De Novo Coiled-Coil Assembly: Cc-Typen-Lald
Other atoms:
Br (3);
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7qdn (Na: 6) - Structure of Human Liver Pyruvate Kinase From Which the B Domain Has Been Deleted
Other atoms:
K (8);
Mg (8);
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7qdq (Na: 2) - Crystal Structure of HDM2 in Complex with Caylin-1
Other atoms:
Cl (11);
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7qf0 (Na: 1) - Crystal Structure of the Sars-Cov-2 Rbd in Complex with the Human Antibody CV2.2325
Other atoms:
Cl (3);
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7qf7 (Na: 1) - Orthorhombic Crystal Structure of Ptg CBM21 in Complex with Beta- Cyclodextrin
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7qh0 (Na: 1) - Apo Structure of the Leishmania Mexicana Triose-Phosphate Isomerase (Lmtim), N11A-E65Q Variant, Open Conformation
Other atoms:
Cl (2);
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7qha (Na: 2) - Cryo-Em Structure of the Tripartite Atp-Independent Periplasmic (Trap) Transporter Siaqm From Photobacterium Profundum in Amphipol
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7qhp (Na: 2) - Structure of I-AG7 with A Bound Hybrid Insulin Peptide
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7qkb (Na: 4) - Crystal Structure of Human Cathepsin L in Complex with Covalently Bound GC376
Other atoms:
Cl (1);
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7qlh (Na: 1) - Crystal Structure of S-Layer Protein Slpa From Lactobacillus Amylovorus, Domain I (Aa 48-213)
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7qny (Na: 1) - The Receptor Binding Domain of Sars-Cov-2 Spike Glycoprotein in Complex with Covox-58 and Covox-158 Fabs
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7qoa (Na: 2) - Structure of Codb, A Cytosine Transporter in An Outward-Facing Conformation
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7qq1 (Na: 1) - X-Ray Structure of the Adduct Obtained Upon Reaction of [Cis- RH2(OCOCH3)2(OCOCF3)2] with Hewl
Other atoms:
Rh (3);
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7qta (Na: 1) - S1 Nuclease From Aspergillus Oryzae in Complex with Uridine
Other atoms:
Zn (6);
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7qtd (Na: 2) - Crystal Structure of the Fe(II)/Alpha-Ketoglutarate Dependent Dioxygenase PLAO1 in Complex with Iron and Alpha-Ketoglutarate
Other atoms:
Fe (4);
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7qte (Na: 3) - Crystal Structure of the Fe(II)/Alpha-Ketoglutarate Dependent Dioxygenase PLAO1 in Complex with Cobalt and Succinate
Other atoms:
Co (3);
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7qtf (Na: 4) - Crystal Structure of the Fe(II)/Alpha-Ketoglutarate Dependent Dioxygenase PLAO1 in Complex with Sodium Succinate
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7qua (Na: 2) - Duplex Rna Containing Xanthosine-Cytosine Base Pairs
Other atoms:
Mg (2);
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7quv (Na: 1) - Crystal Structure of Human Calprotectin (S100A8/S100A9) in Complex with Peptide 3
Other atoms:
Ni (1);
K (1);
Ca (3);
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7qxy (Na: 4) - X-Ray Structure of Furin in Complex with the Dichlorophenylpyridine- Based Inhibitor 3
Other atoms:
Cl (3);
Ca (3);
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7qxz (Na: 2) - X-Ray Structure of Furin in Complex with the Dichlorophenylpyridine- Based Inhibitor 5
Other atoms:
Ca (3);
Cl (3);
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7qy0 (Na: 4) - X-Ray Structure of Furin in Complex with the Dichlorophenylpyridine- Based Inhibitor 1
Other atoms:
Cl (3);
Ca (3);
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7qy1 (Na: 4) - X-Ray Structure of Furin in Complex with the Dichlorophenylpyridine- Based Inhibitor 4
Other atoms:
Cl (3);
Ca (3);
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7qy2 (Na: 4) - X-Ray Structure of Furin in Complex with the Dichlorophenylpyridine- Based Inhibitor 2
Other atoms:
Ca (3);
Cl (3);
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7qz1 (Na: 4) - Formate Dehydrogenase From Starkeya Novella
Other atoms:
Cl (2);
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7qzq (Na: 1) - Crystal Structure of the Kelch Domain of Human KBTBD12
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7r3s (Na: 2) - Ftra/P19 of Rubrivivax Gelatinosus in Complex with Ni
Other atoms:
Ni (1);
Page generated: Sun Dec 15 11:42:17 2024
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