Sodium in PDB, part 255 (files: 10161-10200),
PDB 7qtd-7rga
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 10161-10200 (PDB 7qtd-7rga).
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7qtd (Na: 2) - Crystal Structure of the Fe(II)/Alpha-Ketoglutarate Dependent Dioxygenase PLAO1 in Complex with Iron and Alpha-Ketoglutarate
Other atoms:
Fe (4);
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7qte (Na: 3) - Crystal Structure of the Fe(II)/Alpha-Ketoglutarate Dependent Dioxygenase PLAO1 in Complex with Cobalt and Succinate
Other atoms:
Co (3);
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7qtf (Na: 4) - Crystal Structure of the Fe(II)/Alpha-Ketoglutarate Dependent Dioxygenase PLAO1 in Complex with Sodium Succinate
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7qua (Na: 2) - Duplex Rna Containing Xanthosine-Cytosine Base Pairs
Other atoms:
Mg (2);
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7quv (Na: 1) - Crystal Structure of Human Calprotectin (S100A8/S100A9) in Complex with Peptide 3
Other atoms:
Ni (1);
K (1);
Ca (3);
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7qxy (Na: 4) - X-Ray Structure of Furin in Complex with the Dichlorophenylpyridine- Based Inhibitor 3
Other atoms:
Cl (3);
Ca (3);
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7qxz (Na: 2) - X-Ray Structure of Furin in Complex with the Dichlorophenylpyridine- Based Inhibitor 5
Other atoms:
Ca (3);
Cl (3);
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7qy0 (Na: 4) - X-Ray Structure of Furin in Complex with the Dichlorophenylpyridine- Based Inhibitor 1
Other atoms:
Cl (3);
Ca (3);
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7qy1 (Na: 4) - X-Ray Structure of Furin in Complex with the Dichlorophenylpyridine- Based Inhibitor 4
Other atoms:
Cl (3);
Ca (3);
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7qy2 (Na: 4) - X-Ray Structure of Furin in Complex with the Dichlorophenylpyridine- Based Inhibitor 2
Other atoms:
Ca (3);
Cl (3);
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7qz1 (Na: 4) - Formate Dehydrogenase From Starkeya Novella
Other atoms:
Cl (2);
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7qzq (Na: 1) - Crystal Structure of the Kelch Domain of Human KBTBD12
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7r3s (Na: 2) - Ftra/P19 of Rubrivivax Gelatinosus in Complex with Ni
Other atoms:
Ni (1);
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7r4u (Na: 5) - Apoform of Ftra/P19 From Rubrivivax Gelatinosus
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7r5o (Na: 24) - 1.58 A Structure of Human Apoferritin Obtained From Titan Krios 2 at Ebic, Dls Under Commissioning Session CM26464-2
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7r63 (Na: 4) - NB82, A Nanobody Against Voltage Gated Sodium Channels NAV1.4 and NAV1.5
Other atoms:
Cl (1);
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7r6t (Na: 1) - Human Exog Complexed with Drp-Containing Dna
Other atoms:
Mg (4);
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7r8p (Na: 1) - Open Form of SAOUHSC_02373 in Complex with Adp, MG2+ and Na+
Other atoms:
Cl (1);
Mg (1);
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7r8q (Na: 6) - Closed Form of SAOUHSC_02373 in Complex with Adp, Citrate, MG2+ and Na+
Other atoms:
Mg (2);
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7r9x (Na: 12) - Crystal Structure of A Dehydrating Condensation Domain, Ambe-Cmodaa, Involved in Nonribosomal Peptide Synthesis
Other atoms:
I (5);
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7rad (Na: 2) - Crystal Structure Analysis of ALDH1B1
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7rax (Na: 1) - Atp-Binding State of the Nucleotide-Binding Domain of HSP70 Dnak Mutant T199A
Other atoms:
K (1);
Mg (1);
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7rbe (Na: 4) - Human Dna Polymerase Beta Crosslinked Binary Complex - A
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7rbf (Na: 2) - Human Dna Polymerase Beta Crosslinked Binary Complex - B
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7rbg (Na: 2) - Human Dna Polymerase Beta Crosslinked Ternary Complex 1
Other atoms:
Ca (3);
Cl (2);
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7rc0 (Na: 1) - X-Ray Structure of Sars-Cov-2 Main Protease Covalently Modified By Compound Grl-091-20
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7rc2 (Na: 1) - Aeronamide N-Methyltransferase, Aere
Other atoms:
Ca (1);
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7rc3 (Na: 2) - Aeronamide N-Methyltransferase, Aere (Y137F)
Other atoms:
Ca (1);
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7rc4 (Na: 2) - Aeronamide N-Methyltransferase, Aere (D141A)
Other atoms:
Ca (1);
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7rc6 (Na: 1) - Aeronamide N-Methyltransferase, Aere, Bound to Modified Peptide Substrate, Aera-Dl,34
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7rce (Na: 1) - Third Stage Reengineered Variant of I-Onui with Specificity Enhancing Substitutions
Other atoms:
Ca (3);
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7rcf (Na: 1) - Fourth Stage Reengineered Variant of I-Onui with Stability Enhancing Substitutions
Other atoms:
Cl (1);
Ca (3);
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7rcg (Na: 5) - I-ONUI_E-HPD1-F Final Stage Reengineered Variant of I-Onui
Other atoms:
Ca (2);
Cl (3);
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7rcl (Na: 4) - Crystal Structure of Adp-Bound Galactokinase
Other atoms:
Mg (4);
-
7rcm (Na: 2) - Crystal Structure of Adp-Bound Galactokinase
Other atoms:
Mg (2);
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7rcp (Na: 6) - Gltph Mutant (S279E/D405N) in Complex with Aspartate and Sodium Ions
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7rec (Na: 1) - Structure of THR354ASN, GLU355GLN, THR412ASN, ILE414MET, ILE464HIS, and PHE467MET Mutant Human Camkii Alpha Hub Bound to 5-Hdc
Other atoms:
Cl (12);
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7rey (Na: 2) - Mycobacterium Abscessus Trna Methyltransferase in Apo Form
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7rg8 (Na: 4) - Crystal Structure of A Stable Heparanase Mutant
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7rga (Na: 14) - Crystal Structure of NANOCLAMP3:Vhh in Complex with Mtx
Page generated: Thu Dec 28 11:30:53 2023
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