Sodium in PDB 7now: Complex of Nucleoporin-98 and Nanobody MS98-27 Solved at 1.85A Resolution

The structure of Complex of Nucleoporin-98 and Nanobody MS98-27 Solved at 1.85A Resolution, PDB code: 7now was solved by M.Sola-Colom, S.Trakhanov, D.Goerlich, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.83 / 1.85
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	113.8, 149.81, 85.09, 90, 133.09, 90
R / Rfree (%)	18.4 / 20.9

The binding sites of Sodium atom in the Complex of Nucleoporin-98 and Nanobody MS98-27 Solved at 1.85A Resolution (pdb code 7now). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Complex of Nucleoporin-98 and Nanobody MS98-27 Solved at 1.85A Resolution, PDB code: 7now:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Complex of Nucleoporin-98 and Nanobody MS98-27 Solved at 1.85A Resolution


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Complex of Nucleoporin-98 and Nanobody MS98-27 Solved at 1.85A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Na901 b:53.1 occ:0.76 O B:HOH1018 2.6 44.1 0.7 OG1 B:THR808 2.8 44.5 1.0 O B:GLN806 2.8 44.6 1.0 OE1 B:GLN806 3.3 55.0 1.0 C B:GLN806 3.6 49.3 1.0 CB B:THR808 3.6 42.6 1.0 N B:THR808 3.6 42.8 1.0 O B:SER760 3.7 47.2 1.0 OG B:SER760 3.7 47.8 1.0 CG B:GLN806 3.8 46.6 1.0 C B:VAL807 3.9 50.4 1.0 CD B:GLN806 4.0 49.2 1.0 O B:HOH1007 4.0 46.3 0.9 N B:TYR762 4.1 43.6 1.0 CB B:GLN806 4.1 47.8 1.0 CB B:TYR762 4.1 47.5 1.0 N B:VAL807 4.2 39.3 1.0 CA B:THR808 4.2 42.0 1.0 CA B:VAL807 4.3 42.8 1.0 C B:SER760 4.3 46.8 1.0 O B:VAL807 4.5 46.8 1.0 CA B:GLN806 4.5 47.0 1.0 CA B:ILE761 4.6 36.3 1.0 N B:ILE761 4.7 41.5 1.0 C B:ILE761 4.7 48.1 1.0 CG1 B:VAL860 4.7 47.1 1.0 CA B:TYR762 4.7 44.2 1.0 O B:HOH1019 4.9 47.3 0.8 CB B:SER760 4.9 41.8 1.0 CG2 B:THR808 4.9 44.2 1.0

Sodium binding site 2 out of 2 in the Complex of Nucleoporin-98 and Nanobody MS98-27 Solved at 1.85A Resolution


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Complex of Nucleoporin-98 and Nanobody MS98-27 Solved at 1.85A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ D:Na901 b:49.9 occ:0.65 O D:ARG843 2.7 42.8 1.0 O D:ALA847 3.0 46.1 1.0 CA D:ARG843 3.4 43.1 1.0 C D:GLY846 3.4 43.3 1.0 CA D:GLY846 3.4 39.1 1.0 C D:ARG843 3.4 44.8 1.0 N D:ALA847 3.6 42.9 1.0 N D:GLY846 3.7 38.7 1.0 O D:SER842 3.9 41.8 1.0 O D:GLY846 3.9 43.5 1.0 C D:ALA847 4.0 46.7 1.0 CB D:ARG843 4.2 48.5 1.0 CA D:ALA847 4.4 42.4 1.0 N D:ARG843 4.4 39.3 1.0 C D:SER842 4.6 43.2 1.0 N D:LYS844 4.7 43.0 1.0

M.Sola-Colom, S.Trakhanov, D.Goerlich. Complex of Nucleoporin-98 and Nanobody MS98-27 Solved at 1.85A Resolution To Be Published.