Sodium in PDB, part 68 (files: 2681-2720),
PDB 3k9g-3la1
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 2681-2720 (PDB 3k9g-3la1).
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3k9g (Na: 1) - Crystal Structure of A Plasmid Partition Protein From Borrelia Burgdorferi at 2.25A Resolution, Iodide Soak
Other atoms:
I (12);
-
3k9x (Na: 2) - X-Ray Crystal Structure of Human Fxa in Complex with (S)-N- ((2-Methylbenzofuran-5-Ylamino)(2-Oxo-1-(2-Oxo-2- (Pyrrolidin-1-Yl)Ethyl)Azepan-3- Ylamino)Methylene) Nicotinamide
Other atoms:
Ca (2);
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3kam (Na: 2) - Hen Egg White Lysozyme Derivatized with Rhenium(I) Diaquatricarbonyl Cation
Other atoms:
Re (1);
Cl (1);
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3kbc (Na: 6) - Crystal Structure of Gltph K55C-A364C Mutant Crosslinked with Divalent Mercury
Other atoms:
Hg (3);
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3kbk (Na: 1) - Epi-Isozizaene Synthase Complexed with Hg
Other atoms:
Hg (6);
Cl (3);
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3ked (Na: 2) - Crystal Structure of Aminopeptidase N in Complex with 2,4- Diaminobutyric Acid
Other atoms:
Zn (1);
-
3ker (Na: 4) - D-Dopachrome Tautomerase (D-Dt)/ Macrophage Migration Inhibitory Factor 2 (MIF2) Complexed with Inhibitor 4-Ipp
Other atoms:
Cl (12);
-
3keu (Na: 2) - Crystal Structure of Human Pl Kinase with Bound Plp and Atp
Other atoms:
Mg (4);
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3kgd (Na: 5) - Crystal Structure of E. Coli Rna 3' Cyclase
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3kgq (Na: 1) - Carboxypeptidase A Liganded to An Organic Small-Molecule: Conformational Changes
Other atoms:
Zn (1);
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3kii (Na: 2) - Agao 5-Phenoxy-2,3-Pentadienylamine Complex
Other atoms:
Cu (2);
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3kl0 (Na: 4) - Crystal Structure of the Glucuronoxylan Xylanohydrolase Xync From Bacillus Subtilis
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3klb (Na: 1) - Crystal Structure of Putative Flavoprotein in Complex with Fmn (YP_213683.1) From Bacteroides Fragilis Nctc 9343 at 1.75 A Resolution
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3kn4 (Na: 1) - Agao 6-Phenyl-2,3-Hexadienylamine Complex
Other atoms:
Cu (1);
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3knt (Na: 4) - Crystal Structure of Methanocaldococcus Jannaschii 8- Oxoguanine Glycosylase/Lyase in Complex with 15MER Dna Containing 8-Oxoguanine
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3kqb (Na: 2) - Factor Xa in Complex with the Inhibitor N-(3-Fluoro-2'- (Methylsulfonyl)Biphenyl-4-Yl)-1-(3-(5-Oxo-4,5-Dihydro-1H- 1,2,4- Triazol-3-Yl)Phenyl)-3-(Trifluoromethyl)-1H- Pyrazole-5-Carboxamide
Other atoms:
F (4);
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3kqc (Na: 2) - Factor Xa in Complex with the Inhibitor 6-(2'- (Methylsulfonyl) Biphenyl-4-Yl)-1-(3-(5-Oxo-4,5-Dihydro-1H- 1,2,4-Triazol-3-Yl) Phenyl)-3-(Trifluoromethyl)-5,6- Dihydro-1H-Pyrazolo[3,4-C]Pyridin- 7(4H)-One
Other atoms:
F (3);
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3kqd (Na: 2) - Factor Xa in Complex with the Inhibitor 1-(3-(5-Oxo-4,5- Dihydro-1H-1, 2,4-Triazol-3-Yl)Phenyl)-6-(2'-(Pyrrolidin-1- Ylmethyl)Biphenyl-4- Yl)-3-(Trifluoromethyl)-5,6-Dihydro- 1H-Pyrazolo[3,4-C]Pyridin-7(4H)- One
Other atoms:
F (3);
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3kqe (Na: 2) - Factor Xa in Complex with the Inhibitor 3-Methyl-1-(3-(5- Oxo-4,5- Dihydro-1H-1,2,4-Triazol-3-Yl)Phenyl)-6-(2'- (Pyrrolidin-1-Ylmethyl) Biphenyl-4-Yl)-5,6-Dihydro-1H- Pyrazolo[3,4-C]Pyridin-7(4H)-One
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3krs (Na: 2) - Structure of Triosephosphate Isomerase From Cryptosporidium Parvum at 1.55A Resolution
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3kw8 (Na: 2) - Two-Domain Laccase From Streptomyces Coelicolor at 2.3 A Resolution
Other atoms:
Fe (1);
Cu (4);
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3kwm (Na: 2) - Crystal Structure of Ribose-5-Isomerase A
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3kyj (Na: 1) - Crystal Structure of the P1 Domain of CHEA3 in Complex with CHEY6 From R. Sphaeroides
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3kzw (Na: 19) - Crystal Structure of Cytosol Aminopeptidase From Staphylococcus Aureus Col
Other atoms:
Cl (67);
-
3l0o (Na: 2) - Structure of Rna-Free Rho Transcription Termination Factor From Thermotoga Maritima
Other atoms:
U (7);
-
3l1o (Na: 2) - Crystal Structure of Monoclonal Antibody MN423 Fab Fragment with Free Combining Site, Crystallized in the Presence of Zinc
Other atoms:
Zn (1);
-
3l25 (Na: 8) - Crystal Structure of Zaire Ebola VP35 Interferon Inhibitory Domain Bound to 8 Bp Dsrna
Other atoms:
Mg (1);
Cl (4);
-
3l27 (Na: 1) - Crystal Structure of Zaire Ebola VP35 Interferon Inhibitory Domain R312A Mutant
Other atoms:
K (2);
Cl (6);
-
3l28 (Na: 5) - Crystal Structure of Zaire Ebola VP35 Interferon Inhibitory Domain K339A Mutant
Other atoms:
Cl (12);
-
3l6i (Na: 2) - Crystal Structure of the Uncharacterized Lipoprotein Yceb From E. Coli at the Resolution 2.0A. Northeast Structural Genomics Consortium Target ER542
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3l6t (Na: 1) - Crystal Structure of An N-Terminal Mutant of the Plasmid PCU1 Trai Relaxase Domain
Other atoms:
Ni (2);
Mg (1);
Cl (3);
-
3l7x (Na: 2) - The Crystal Structure of Smu.412C From Streptococcus Mutans UA159
Other atoms:
Zn (1);
-
3l88 (Na: 11) - Crystal Structure of the Human Adenovirus Type 21 Fiber Knob
Other atoms:
Cl (2);
-
3l8g (Na: 1) - Crystal Structure of D,D-Heptose 1.7-Bisphosphate Phosphatase From E. Coli Complexed with D-Glycero-D-Manno- Heptose 1 ,7-Bisphosphate
Other atoms:
Mg (1);
Zn (1);
-
3l8l (Na: 4) - Gramicidin D Complex with Sodium Iodide
Other atoms:
I (7);
-
3l8m (Na: 3) - Crystal Structure of A Probable Thiamine Pyrophosphokinase From Staphylococcus Saprophyticus Subsp. Saprophyticus. Northeast Structural Genomics Consortium Target Id SYR86
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3l8w (Na: 1) - Urate Oxidase From Aspergillus Flavus Complexed with Xanthin
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3l9a (Na: 1) - Structure of the C-Terminal Domain From A Streptococcus Mutans Hypothetical
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3l9g (Na: 1) - Urate Oxidase Complexed with Uric Acid and Chloride
Other atoms:
Cl (1);
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3la1 (Na: 2) - High Resolution Crystal Structure of Cypet Mutant A167I
Page generated: Wed Nov 13 12:59:51 2024
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