Sodium in PDB 3l6i: Crystal Structure of the Uncharacterized Lipoprotein Yceb From E. Coli at the Resolution 2.0A. Northeast Structural Genomics Consortium Target ER542

The structure of Crystal Structure of the Uncharacterized Lipoprotein Yceb From E. Coli at the Resolution 2.0A. Northeast Structural Genomics Consortium Target ER542, PDB code: 3l6i was solved by A.P.Kuzin, H.Neely, J.Seetharaman, C.X.Chen, H.Janjua, K.Cunningham, L.-C.Ma, R.Xiao, J.Liu, M.C.Baran, T.B.Acton, B.Rost, G.T.Montelione, L.Tong, J.F.Hunt, Northeast Structural Genomics Consortium (Nesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.79 / 2.01
Space group	C 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	109.050, 174.550, 43.800, 90.00, 90.00, 90.00
R / Rfree (%)	20.5 / 24.7

The binding sites of Sodium atom in the Crystal Structure of the Uncharacterized Lipoprotein Yceb From E. Coli at the Resolution 2.0A. Northeast Structural Genomics Consortium Target ER542 (pdb code 3l6i). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Crystal Structure of the Uncharacterized Lipoprotein Yceb From E. Coli at the Resolution 2.0A. Northeast Structural Genomics Consortium Target ER542, PDB code: 3l6i:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Crystal Structure of the Uncharacterized Lipoprotein Yceb From E. Coli at the Resolution 2.0A. Northeast Structural Genomics Consortium Target ER542


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of the Uncharacterized Lipoprotein Yceb From E. Coli at the Resolution 2.0A. Northeast Structural Genomics Consortium Target ER542 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na1 b:12.9 occ:0.50 ND2 A:ASN137 3.3 17.0 1.0 O A:HOH218 3.4 24.3 1.0 OE1 A:GLN133 3.5 22.6 1.0 CA A:ALA134 3.6 17.3 1.0 CG A:GLN133 4.0 14.6 1.0 N A:ALA134 4.1 18.8 1.0 O A:GLN133 4.1 20.1 1.0 CB A:ASN137 4.1 20.2 1.0 CB A:ALA134 4.1 16.6 1.0 CD A:GLN133 4.1 19.3 1.0 CG A:ASN137 4.2 23.1 1.0 C A:GLN133 4.3 21.2 1.0 O A:HOH253 4.7 61.0 0.5 C A:ALA134 4.7 20.4 1.0 CB A:GLN133 4.9 18.7 1.0 O A:ALA134 4.9 19.6 1.0

Sodium binding site 2 out of 2 in the Crystal Structure of the Uncharacterized Lipoprotein Yceb From E. Coli at the Resolution 2.0A. Northeast Structural Genomics Consortium Target ER542


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Crystal Structure of the Uncharacterized Lipoprotein Yceb From E. Coli at the Resolution 2.0A. Northeast Structural Genomics Consortium Target ER542 within 5.0Å range: probe atom residue distance (Å) B Occ B:Na2 b:20.7 occ:0.50 O B:HOH213 3.4 42.5 1.0 NE2 B:GLN133 3.4 24.1 1.0 ND2 B:ASN137 3.5 31.0 1.0 CA B:ALA134 3.7 25.9 1.0 CG B:GLN133 3.8 25.2 1.0 N B:ALA134 4.1 23.1 1.0 CD B:GLN133 4.1 28.8 1.0 CB B:ALA134 4.1 24.9 1.0 O B:GLN133 4.2 25.8 1.0 C B:GLN133 4.3 23.9 1.0 CB B:ASN137 4.4 23.9 1.0 CG B:ASN137 4.5 33.1 1.0 CB B:GLN133 4.9 20.9 1.0 C B:ALA134 4.9 28.8 1.0 O B:ALA134 5.0 31.1 1.0

A.P.Kuzin, H.Neely, J.Seetharaman, C.X.Chen, H.Janjua, K.Cunningham, L.-C.Ma, R.Xiao, J.Liu, M.C.Baran, T.B.Acton, B.Rost, G.T.Montelione, L.Tong, J.F.Hunt. Crystal Structure of the Uncharacterized Lipoprotein Yceb From E. Coli at the Resolution 2.0A. Northeast Structural Genomics Consortium Target ER542 To Be Published.