Sodium in PDB, part 63 (files: 2481-2520),
PDB 3gdx-3h09
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 2481-2520 (PDB 3gdx-3h09).
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3gdx (Na: 2) - Dna Polymerase Beta with A Gapped Dnd Substrate and Dtmp(CF2)Pp
Other atoms:
F (2);
Mg (2);
Cl (2);
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3ged (Na: 2) - Fingerprint and Structural Analysis of A Apo Scor Enzyme From Clostridium Thermocellum
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3geg (Na: 2) - Fingerprint and Structural Analysis of A Scor Enzyme with Its Bound Cofactor From Clostridium Thermocellum
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3geo (Na: 1) - Sulfite Reductase Hemoprotein Nitrite Complex
Other atoms:
Fe (5);
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3geu (Na: 1) - Crystal Structure of Icar From Staphylococcus Aureus, A Member of the Tetracycline Repressor Protein Family
Other atoms:
Cl (6);
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3gii (Na: 1) - DPO4 Extension Ternary Complex with Disordered A Opposite An Oxog in Anti Conformation
Other atoms:
Ca (3);
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3gir (Na: 1) - Crystal Structure of Glycine Cleavage System Aminomethyltransferase T From Bartonella Henselae
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3gjc (Na: 2) - Crystal Structure of the E290S Mutant of Leut with Bound Og
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3gjd (Na: 2) - Crystal Structure of Leut with Bound Og
Other atoms:
Cl (1);
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3gjl (Na: 1) - Crystal Structure of A Dna Duplex Containing 7,8- Dihydropyridol[2,3-D]Pyrimidin-2-One
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3gjx (Na: 2) - Crystal Structure of the Nuclear Export Complex CRM1- SNURPORTIN1-Rangtp
Other atoms:
Mg (2);
Cl (1);
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3gl5 (Na: 1) - Crystal Structure of Probable Dsba Oxidoreductase SCO1869 From Streptomyces Coelicolor
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3gnk (Na: 2) - Calcium Bound to the Holliday Junction Sequence D(Tcggcgccga)4
Other atoms:
Ca (2);
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3gns (Na: 1) - Crystal Structure of the Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) in Apo Form (One Molecule in Au)
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3goa (Na: 1) - Crystal Structure of the Salmonella Typhimurium Fada 3- Ketoacyl-Coa Thiolase
Other atoms:
Ca (2);
Cl (2);
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3god (Na: 2) - Structural Basis For Dnase Activity of A Conserved Protein Implicated in Crispr-Mediated Antiviral Defense
Other atoms:
Mn (4);
Ca (2);
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3gox (Na: 3) - Crystal Structure of the Beta-Beta-Alpha-Me Type II Restriction Endonuclease HPY99I in the Absence of Edta
Other atoms:
Zn (4);
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3gp4 (Na: 1) - Crystal Structure of Putative Merr Family Transcriptional Regulator From Listeria Monocytogenes
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3gq9 (Na: 2) - Crystal Structure of the Bacteriophage PHI29 Gene Product 12 N-Terminal Fragment in An Apo Form
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3grd (Na: 2) - Crystal Structure of NTF2-Superfamily Protein with Unknown Function (NP_977240.1) From Bacillus Cereus Atcc 10987 at 1.25 A Resolution
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3gsd (Na: 22) - 2.05 Angstrom Structure of A Divalent-Cation Tolerance Protein (Cuta) From Yersinia Pestis
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3gsh (Na: 3) - Three-Dimensional Structure of A Post Translational Modified Barley LTP1
Other atoms:
F (6);
Zn (4);
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3gsj (Na: 1) - A Bulky Rhodium Complex Bound to An Adenosine-Adenosine Dna Mismatch
Other atoms:
Rh (2);
Cl (1);
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3gtd (Na: 1) - 2.4 Angstrom Crystal Structure of Fumarate Hydratase From Rickettsia Prowazekii
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3gti (Na: 3) - D71G/E101G/M234L Mutant in Organophosphorus Hydrolase From Deinococcus Radiodurans
Other atoms:
Co (2);
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3gud (Na: 1) - Crystal Structure of A Novel Intramlolecular Chaperon
Other atoms:
Br (1);
Cl (1);
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3gvf (Na: 1) - 1.7 Angstrom Crystal Structure of Inorganic Pyrophosphatase From Burkholderia Pseudomallei Bound with Phosphate
Other atoms:
K (1);
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3gvk (Na: 3) - Crystal Structure of Endo-Neuraminidase Nf Mutant
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3gwo (Na: 1) - Structure of the C-Terminal Domain of A Putative Hiv-1 GP41 Fusion Intermediate
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3gwq (Na: 1) - Crystal Structure of D-Serine Deaminase From Burkholderia Xenovorans LB400 (YP_556991.1) From Burkholderia Xenovorans LB400 at 2.00 A Resolution
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3gwu (Na: 2) - Leucine Transporter Leut in Complex with Sertraline
Other atoms:
Cl (2);
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3gwv (Na: 2) - Leucine Transporter Leut in Complex with R-Fluoxetine
Other atoms:
F (3);
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3gww (Na: 2) - Leucine Transporter Leut in Complex with S-Fluoxetine
Other atoms:
F (3);
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3gxw (Na: 4) - Structure of the SH2 Domain of the Candida Glabrata Transcription Elongation Factor SPT6, Crystal Form A
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3gyz (Na: 1) - Crystal Structure of Ipgc From Shigella Flexneri
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3gz5 (Na: 2) - Crystal Structure of Shewanella Oneidensis Nrtr
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3gz6 (Na: 1) - Crystal Structure of Shewanella Oneidensis Nrtr Complexed with A 27MER Dna
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3gza (Na: 2) - Crystal Structure of Putative Alpha-L-Fucosidase (NP_812709.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 1.60 A Resolution
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3gzh (Na: 2) - Crystal Structure of Phosphate-Bound Adenylosuccinate Lyase From E. Coli
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3h09 (Na: 4) - The Structure of Haemophilus Influenzae IGA1 Protease
Page generated: Thu Dec 28 11:16:02 2023
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