Sodium in PDB, part 7 (files: 241-280),
PDB 1ghy-1hn1
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 241-280 (PDB 1ghy-1hn1).
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1ghy (Na: 1) - A Novel Serine Protease Inhibition Motif Involving A Multi- Centered Short Hydrogen Bonding Network at the Active Site
Other atoms:
Zn (3);
Ca (1);
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1gj4 (Na: 1) - Selectivity at S1, H2O Displacement, Upa, Tpa, SER190/ALA190 Protease, Structure-Based Drug Design
Other atoms:
Cl (1);
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1gj5 (Na: 1) - Selectivity at S1, H2O Displacement, Upa, Tpa, SER190/ALA190 Protease, Structure-Based Drug Design
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1glh (Na: 1) - Cation Binding to A Bacillus (1,3-1,4)-Beta-Glucanase. Geometry, Affinity and Effect on Protein Stability
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1gmm (Na: 1) - Carbohydrate Binding Module CBM6 From Xylanase U Clostridium Thermocellum
Other atoms:
Ca (1);
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1gn0 (Na: 1) - Escherichia Coli Glpe Sulfurtransferase Soaked with Kcn
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1gny (Na: 1) - Xylan-Binding Module CBM15
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1gof (Na: 1) - Novel Thioether Bond Revealed By A 1.7 Angstroms Crystal Structure of Galactose Oxidase
Other atoms:
Cu (1);
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1gog (Na: 1) - Novel Thioether Bond Revealed By A 1.7 Angstroms Crystal Structure of Galactose Oxidase
Other atoms:
Cu (1);
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1goh (Na: 1) - Novel Thioether Bond Revealed By A 1.7 Angstroms Crystal Structure of Galactose Oxidase
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1gq2 (Na: 36) - Malic Enzyme From Pigeon Liver
Other atoms:
Mn (16);
Cl (33);
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1gr3 (Na: 1) - Structure of the Human Collagen X NC1 Trimer
Other atoms:
Ca (2);
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1gug (Na: 2) - Mopii From Clostridium Pasteurianum Complexed with Tungstate
Other atoms:
W (8);
Cl (2);
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1guu (Na: 1) - Crystal Structure of C-Myb R1
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1gv2 (Na: 2) - Crystal Structure of C-Myb R2R3
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1gv5 (Na: 1) - Crystal Structure of C-Myb R2
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1gvf (Na: 2) - Structure of Tagatose-1,6-Bisphosphate Aldolase
Other atoms:
Zn (2);
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1gvh (Na: 2) - The X-Ray Structure of Ferric Escherichia Coli Flavohemoglobin Reveals An Unespected Geometry of the Distal Heme Pocket
Other atoms:
Fe (1);
Cl (1);
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1gvy (Na: 1) - Substrate Distorsion By Beta-Mannanase From Pseudomonas Cellulosa
Other atoms:
F (1);
Zn (2);
-
1gw1 (Na: 1) - Substrate Distortion By Beta-Mannanase From Pseudomonas Cellulosa
Other atoms:
F (2);
Zn (2);
-
1gwd (Na: 3) - Tri-Iodide Derivative of Hen Egg-White Lysozyme
Other atoms:
I (5);
Cl (7);
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1gwt (Na: 1) - Recombinant Horseradish Peroxidase C1A PHE221MET
Other atoms:
Fe (1);
Ca (2);
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1gwu (Na: 1) - Recombinant Horseradish Peroxidase C1A ALA140GLY
Other atoms:
Fe (1);
Ca (2);
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1gz1 (Na: 2) - Mutant D416A of the Cellobiohydrolase CEL6A From Humicola Insolens in Complex with Methyl-Cellobiosyl-4-Deoxy-4-Thio-Beta-D-Cellobioside
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1gzg (Na: 2) - Complex of A MG2-Dependent Porphobilinogen Synthase From Pseudomonas Aeruginosa (Mutant D139N) with 5-Fluorolevulinic Acid
Other atoms:
F (6);
Mg (2);
K (2);
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1h16 (Na: 7) - Pyruvate Formate-Lyase (E.Coli) in Complex with Pyruvate and Coa
Other atoms:
Mg (1);
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1h17 (Na: 7) - Pyruvate Formate-Lyase (E.Coli) in Complex with Coa and the Substrate Analog Oxamate
Other atoms:
Mg (1);
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1h18 (Na: 7) - Pyruvate Formate-Lyase (E.Coli) in Complex with Pyruvate
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1h5v (Na: 2) - Thiopentasaccharide Complex of the Endoglucanase CEL5A From Bacillus Agaradharens at 1.1 A Resolution in the Tetragonal Crystal Form
Other atoms:
Ca (10);
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1h6m (Na: 1) - Covalent Glycosyl-Enzyme Intermediate of Hen Egg White Lysozyme
Other atoms:
F (1);
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1h80 (Na: 6) - 1,3-Alpha-1,4-Beta-D-Galactose-4-Sulfate- 3,6-Anhydro-D-Galactose-2-Sulfate 4 Galactohydrolase
Other atoms:
Cl (2);
Ca (6);
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1hbm (Na: 9) - Methyl-Coenzyme M Reductase Enzyme Product Complex
Other atoms:
Ni (2);
Mg (5);
Zn (1);
Cl (2);
-
1hbn (Na: 10) - Methyl-Coenzyme M Reductase
Other atoms:
Ni (2);
Mg (18);
Zn (1);
Cl (2);
-
1hbo (Na: 8) - Methyl-Coenzyme M Reductase Mcr-RED1-Silent
Other atoms:
Ni (2);
Mg (4);
Zn (1);
Cl (2);
-
1hbu (Na: 9) - Methyl-Coenzyme M Reductase in the Mcr-RED1-Silent State in Complex with Coenzyme M
Other atoms:
Ni (2);
Mg (13);
Zn (1);
Cl (2);
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1hf4 (Na: 3) - Structural Effects of Monovalent Anions on Polymorphic Lysozyme Crystals
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1hhy (Na: 2) - Deglucobalhimycin in Complex with D-Ala-D-Ala
Other atoms:
Cl (4);
-
1hlk (Na: 2) - Metallo-Beta-Lactamase From Bacteroides Fragilis in Complex with A Tricyclic Inhibitor
Other atoms:
Zn (4);
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1hn0 (Na: 1) - Crystal Structure of Chondroitin Abc Lyase I From Proteus Vulgaris at 1.9 Angstroms Resolution
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1hn1 (Na: 7) - E. Coli (Lac Z) Beta-Galactosidase (Orthorhombic)
Other atoms:
Mg (8);
Page generated: Wed Nov 13 12:57:32 2024
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