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Sodium in PDB 1gwu: Recombinant Horseradish Peroxidase C1A ALA140GLY

Enzymatic activity of Recombinant Horseradish Peroxidase C1A ALA140GLY

All present enzymatic activity of Recombinant Horseradish Peroxidase C1A ALA140GLY:
1.11.1.7;

Protein crystallography data

The structure of Recombinant Horseradish Peroxidase C1A ALA140GLY, PDB code: 1gwu was solved by A.Henriksen, N.Brissett, M.Gajhede, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 13.90 / 1.31
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 40.037, 66.806, 116.356, 90.00, 90.00, 90.00
R / Rfree (%) 17.2 / 19.3

Other elements in 1gwu:

The structure of Recombinant Horseradish Peroxidase C1A ALA140GLY also contains other interesting chemical elements:

Iron (Fe) 1 atom
Calcium (Ca) 2 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the Recombinant Horseradish Peroxidase C1A ALA140GLY (pdb code 1gwu). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Recombinant Horseradish Peroxidase C1A ALA140GLY, PDB code: 1gwu:

Sodium binding site 1 out of 1 in 1gwu

Go back to Sodium Binding Sites List in 1gwu
Sodium binding site 1 out of 1 in the Recombinant Horseradish Peroxidase C1A ALA140GLY


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Recombinant Horseradish Peroxidase C1A ALA140GLY within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na503

b:8.3
occ:1.00
O A:HOH2504 1.9 27.7 1.0
O A:HOH2497 2.0 15.9 0.5
O A:HOH2129 2.0 39.5 0.5
O A:HOH2501 2.0 18.5 1.0
O A:HOH2496 2.1 51.5 0.5
O A:HOH2502 3.7 25.4 1.0
O A:HOH2495 3.7 21.3 1.0
O A:HOH2331 3.7 16.1 1.0
NH1 A:ARG283 4.2 16.4 1.0
OD1 A:ASN286 4.4 21.4 1.0
O A:GLY156 4.4 14.9 1.0
O A:ARG283 4.6 8.1 1.0
CB A:ASN286 4.8 11.4 1.0
O A:ASN286 4.8 10.0 1.0
CZ A:ARG283 4.9 15.3 1.0

Reference:

A.Henriksen, N.Brissett, M.Gajhede. Hrpc Heme Crevice Architecture To Be Published.
Page generated: Sun Oct 6 18:39:15 2024

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