Sodium in PDB 1gn0: Escherichia Coli Glpe Sulfurtransferase Soaked with Kcn

All present enzymatic activity of Escherichia Coli Glpe Sulfurtransferase Soaked with Kcn:
2.8.1.1;

The structure of Escherichia Coli Glpe Sulfurtransferase Soaked with Kcn, PDB code: 1gn0 was solved by A.Spallarossa, J.T.Donahue, T.J.Larson, M.Bolognesi, D.Bordo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20 / 1.8
Space group	P 32
Cell size a, b, c (Å), α, β, γ (°)	53.796, 53.796, 30.346, 90.00, 90.00, 120.00
R / Rfree (%)	17.348 / 24.822

The binding sites of Sodium atom in the Escherichia Coli Glpe Sulfurtransferase Soaked with Kcn (pdb code 1gn0). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Escherichia Coli Glpe Sulfurtransferase Soaked with Kcn, PDB code: 1gn0:

Sodium binding site 1 out of 1 in the Escherichia Coli Glpe Sulfurtransferase Soaked with Kcn


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Escherichia Coli Glpe Sulfurtransferase Soaked with Kcn within 5.0Å range: probe atom residue distance (Å) B Occ A:Na1109 b:24.2 occ:1.00 SG A:CYS65 2.8 21.0 0.5 OG A:SER70 3.1 34.4 1.0 N A:HIS67 3.1 23.0 1.0 N A:SER70 3.1 24.2 1.0 N A:ASN69 3.3 29.5 1.0 N A:TYR66 3.4 23.2 1.0 CB A:CYS65 3.6 20.5 1.0 SG A:CYS65 3.6 25.1 0.5 N A:GLY68 3.7 29.6 1.0 CB A:TYR66 3.8 22.9 1.0 CA A:ASN69 3.8 28.5 1.0 CB A:ASN69 3.8 34.0 1.0 CA A:TYR66 3.9 25.2 1.0 C A:ASN69 4.0 24.9 1.0 CB A:SER70 4.0 27.9 1.0 C A:TYR66 4.0 25.4 1.0 CA A:HIS67 4.0 23.8 1.0 CA A:SER70 4.1 28.6 1.0 CD2 A:TYR66 4.2 23.1 1.0 C A:HIS67 4.3 29.6 1.0 C A:CYS65 4.3 19.8 1.0 C A:GLY68 4.3 30.5 1.0 ND2 A:ASN69 4.3 49.7 1.0 CB A:HIS67 4.4 25.6 1.0 CG A:ASN69 4.5 40.2 1.0 CG A:TYR66 4.5 18.2 1.0 CA A:GLY68 4.6 32.8 1.0 CA A:CYS65 4.6 19.2 1.0 N A:SER71 4.7 27.8 1.0 C A:SER70 4.9 28.6 1.0

A.Spallarossa, J.T.Donahue, T.J.Larson, M.Bolognesi, D.Bordo. Escherichia Coli Glpe Is A Prototype Sulfurtransferase For the Single-Domain Rhodanese Homology Superfamily Structure V. 9 1117 2001.
ISSN: ISSN 0969-2126
PubMed: 11709175
DOI: 10.1016/S0969-2126(01)00666-9