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Sodium in PDB 1gwt: Recombinant Horseradish Peroxidase C1A PHE221MET

Enzymatic activity of Recombinant Horseradish Peroxidase C1A PHE221MET

All present enzymatic activity of Recombinant Horseradish Peroxidase C1A PHE221MET:
1.11.1.7;

Protein crystallography data

The structure of Recombinant Horseradish Peroxidase C1A PHE221MET, PDB code: 1gwt was solved by A.Henriksen, N.Brissett, M.Gajhede, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 12.95 / 1.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 40.283, 67.185, 117.461, 90.00, 90.00, 90.00
R / Rfree (%) 17.2 / 19.8

Other elements in 1gwt:

The structure of Recombinant Horseradish Peroxidase C1A PHE221MET also contains other interesting chemical elements:

Iron (Fe) 1 atom
Calcium (Ca) 2 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the Recombinant Horseradish Peroxidase C1A PHE221MET (pdb code 1gwt). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Recombinant Horseradish Peroxidase C1A PHE221MET, PDB code: 1gwt:

Sodium binding site 1 out of 1 in 1gwt

Go back to Sodium Binding Sites List in 1gwt
Sodium binding site 1 out of 1 in the Recombinant Horseradish Peroxidase C1A PHE221MET


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Recombinant Horseradish Peroxidase C1A PHE221MET within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na503

b:41.2
occ:1.00
O A:HOH2373 2.1 23.3 1.0
O A:HOH2378 2.2 42.9 1.0
O A:HOH2381 2.3 27.1 1.0
O A:HOH2176 2.3 27.6 1.0
O A:HOH2374 2.4 29.2 1.0
O A:HOH2377 3.8 37.7 1.0
NH1 A:ARG283 4.2 20.5 0.5
O A:HOH2173 4.2 30.0 1.0
OD1 A:ASN286 4.4 24.5 1.0
O A:GLY156 4.5 12.8 1.0
O A:ARG283 4.7 8.0 0.5
O A:ARG283 4.7 8.0 0.5
CG A:ARG283 4.8 13.6 0.5
CZ A:ARG283 4.9 20.4 0.5
CD A:ARG283 5.0 17.1 0.5

Reference:

A.Henriksen, N.Brissett, K.Meno, O.Mirza, M.Gajhede. Hrpc Heme Crevice Architecture To Be Published.
Page generated: Sun Oct 6 18:38:41 2024

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