Atomistry » Sodium » PDB 3bjp-3c7h
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Sodium in PDB, part 55 (files: 2161-2200), PDB 3bjp-3c7h

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 2161-2200 (PDB 3bjp-3c7h).
  1. 3bjp (Na: 1) - Urate Oxidase Cyanide Uric Acid Ternary Complex
  2. 3bk8 (Na: 1) - Urate Oxidase Aza-Xanthine Complex in Cyanide
  3. 3bkc (Na: 1) - Crystal Structure of Anti-Amyloid Beta Fab WO2 (P21, Formb)
  4. 3bkm (Na: 2) - Structure of Anti-Amyloid-Beta Fab WO2 (Form A, P212121)
    Other atoms: Zn (1);
  5. 3blj (Na: 2) - Crystal Structure of Human Poly(Adp-Ribose) Polymerase 15, Catalytic Fragment
    Other atoms: Cl (1);
  6. 3bmo (Na: 1) - Structure of Pteridine Reductase 1 (PTR1) From Trypanosoma Brucei in Ternary Complex with Cofactor (Nadp+) and Inhibitor (Compound AX4)
  7. 3bmx (Na: 4) - Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis
  8. 3bn1 (Na: 1) - Crystal Structure of Gdp-Perosamine Synthase
  9. 3bnt (Na: 1) - Crystal Structure of the Homo Sapiens Mitochondrial Ribosomal Decoding Site in the Presence of [Co(NH3)6]CL3 (A1555G Mutant, Br-Derivative)
    Other atoms: Co (1); Br (1);
  10. 3bos (Na: 1) - Crystal Structure of Putative Dna Replication Regulator Hda (YP_927791.1) From Shewanella Amazonensis SB2B at 1.75 A Resolution
    Other atoms: Mg (2); Cl (1);
  11. 3bov (Na: 1) - Crystal Structure of the Receptor Binding Domain of Mouse Pd-L2
  12. 3bpr (Na: 1) - Crystal Structure of Catalytic Domain of the Proto-Oncogene Tyrosine- Protein Kinase Mer in Complex with Inhibitor C52
    Other atoms: Cl (6);
  13. 3bpx (Na: 6) - Crystal Structure of Marr
  14. 3brq (Na: 1) - Crystal Structure of the Escherichia Coli Transcriptional Repressor Ascg
  15. 3bv8 (Na: 1) - Crystal Structure of the N-Terminal Domain of Tetrahydrodipicolinate Acetyltransferase From Staphylococcus Aureus
  16. 3bv9 (Na: 1) - Structure of Thrombin Bound to the Inhibitor FM19
    Other atoms: I (3);
  17. 3bvb (Na: 1) - Cystal Structure of Hiv-1 Active Site Mutant D25N and Inhibitor Darunavir
    Other atoms: Cl (1);
  18. 3bx1 (Na: 6) - Complex Between the Barley Alpha-Amylase/Subtilisin Inhibitor and the Subtilisin Savinase
    Other atoms: Cl (24); Ca (4);
  19. 3bx2 (Na: 2) - PUF4 Rna Binding Domain Bound to Ho Endonuclease Rna 3' Utr Recognition Sequence
  20. 3bzl (Na: 1) - Crystal Structural of Native Escu C-Terminal Domain
  21. 3c0s (Na: 1) - Uvde 3 Metals
    Other atoms: Mn (3);
  22. 3c0v (Na: 2) - Crystal Structure of Cytokinin-Specific Binding Protein in Complex with Cytokinin and TA6BR12
    Other atoms: Br (60); Ta (30);
  23. 3c0w (Na: 1) - I-Scei in Complex with A Bottom Nicked Dna Substrate
    Other atoms: Ca (3);
  24. 3c17 (Na: 11) - Hexagonal Crystal Structure of Precursor E. Coli Isoaspartyl Peptidase/L-Asparaginase (Ecaiii) with Active- Site T179A Mutation
    Other atoms: Cl (17);
  25. 3c1q (Na: 1) - The Three-Dimensional Structure of the Cytoplasmic Domains of Epsf From the Type 2 Secretion System of Vibrio Cholerae
    Other atoms: Ca (2); Cl (1);
  26. 3c2k (Na: 2) - Dna Polymerase Beta with A Gapped Dna Substrate and Dumpnpp with Manganese in the Active Site
    Other atoms: Mn (5); Cl (4);
  27. 3c2l (Na: 2) - Ternary Complex of Dna Polymerase Beta with A C:Dapcpp Mismatch in the Active Site
    Other atoms: Mn (6);
  28. 3c2m (Na: 6) - Ternary Complex of Dna Polymerase Beta with A G:Dapcpp Mismatch in the Active Site
    Other atoms: Mn (7);
  29. 3c32 (Na: 2) - Crystal Structure of GLUR5 Ligand-Binding Core in Complex with Sodium at 1.72 Angstrom Resolution
    Other atoms: Cl (4);
  30. 3c3v (Na: 1) - Crystal Structure of Peanut Major Allergen Ara H 3
  31. 3c45 (Na: 1) - Human Dipeptidyl Peptidase IV/CD26 in Complex with A Fluoroolefin Inhibitor
    Other atoms: F (2); Cl (2);
  32. 3c4u (Na: 2) - Structure of Class II Fructose-Biphosphate Aldolase From Helicobacter Pylori
    Other atoms: Zn (2);
  33. 3c52 (Na: 2) - Class II Fructose-1,6-Bisphosphate Aldolase From Helicobacter Pylori in Complex with Phosphoglycolohydroxamic Acid, A Competitive Inhibitor
    Other atoms: Zn (2); Ca (2);
  34. 3c5f (Na: 12) - Structure of A Binary Complex of the R517A Pol Lambda Mutant
  35. 3c5g (Na: 8) - Structure of A Ternary Complex of the R517K Pol Lambda Mutant
    Other atoms: Mg (2);
  36. 3c6v (Na: 1) - Crystal Structure of AU4130/APC7354, A Probable Enzyme From the Thermophilic Fungus Aspergillus Fumigatus
    Other atoms: Cl (1);
  37. 3c7e (Na: 2) - Crystal Structure of A Glycoside Hydrolase Family 43 Arabinoxylan Arabinofuranohydrolase From Bacillus Subtilis.
    Other atoms: Ca (1);
  38. 3c7f (Na: 2) - Crystal Structure of A Glycoside Hydrolase Family 43 Arabinoxylan Arabinofuranohydrolase From Bacillus Subtilis in Complex with Xylotriose.
    Other atoms: Ca (1);
  39. 3c7g (Na: 2) - Crystal Structure of A Glycoside Hydrolase Family 43 Arabinoxylan Arabinofuranohydrolase From Bacillus Subtilis in Complex with Xylotetraose.
    Other atoms: Ca (1);
  40. 3c7h (Na: 2) - Crystal Structure of Glycoside Hydrolase Family 43 Arabinoxylan Arabinofuranohydrolase From Bacillus Subtilis in Complex with Axos-4-0.5.
    Other atoms: Ca (1);
Page generated: Tue Dec 1 10:34:57 2020

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