Sodium in PDB, part 55 (files: 2161-2200),
PDB 3bjp-3c7h
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 2161-2200 (PDB 3bjp-3c7h).
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3bjp (Na: 1) - Urate Oxidase Cyanide Uric Acid Ternary Complex
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3bk8 (Na: 1) - Urate Oxidase Aza-Xanthine Complex in Cyanide
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3bkc (Na: 1) - Crystal Structure of Anti-Amyloid Beta Fab WO2 (P21, Formb)
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3bkm (Na: 2) - Structure of Anti-Amyloid-Beta Fab WO2 (Form A, P212121)
Other atoms:
Zn (1);
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3blj (Na: 2) - Crystal Structure of Human Poly(Adp-Ribose) Polymerase 15, Catalytic Fragment
Other atoms:
Cl (1);
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3bmo (Na: 1) - Structure of Pteridine Reductase 1 (PTR1) From Trypanosoma Brucei in Ternary Complex with Cofactor (Nadp+) and Inhibitor (Compound AX4)
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3bmx (Na: 4) - Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis
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3bn1 (Na: 1) - Crystal Structure of Gdp-Perosamine Synthase
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3bnt (Na: 1) - Crystal Structure of the Homo Sapiens Mitochondrial Ribosomal Decoding Site in the Presence of [Co(NH3)6]CL3 (A1555G Mutant, Br-Derivative)
Other atoms:
Co (1);
Br (1);
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3bos (Na: 1) - Crystal Structure of Putative Dna Replication Regulator Hda (YP_927791.1) From Shewanella Amazonensis SB2B at 1.75 A Resolution
Other atoms:
Mg (2);
Cl (1);
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3bov (Na: 1) - Crystal Structure of the Receptor Binding Domain of Mouse Pd-L2
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3bpr (Na: 1) - Crystal Structure of Catalytic Domain of the Proto-Oncogene Tyrosine- Protein Kinase Mer in Complex with Inhibitor C52
Other atoms:
Cl (6);
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3bpx (Na: 6) - Crystal Structure of Marr
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3brq (Na: 1) - Crystal Structure of the Escherichia Coli Transcriptional Repressor Ascg
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3bv8 (Na: 1) - Crystal Structure of the N-Terminal Domain of Tetrahydrodipicolinate Acetyltransferase From Staphylococcus Aureus
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3bv9 (Na: 1) - Structure of Thrombin Bound to the Inhibitor FM19
Other atoms:
I (3);
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3bvb (Na: 1) - Cystal Structure of Hiv-1 Active Site Mutant D25N and Inhibitor Darunavir
Other atoms:
Cl (1);
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3bx1 (Na: 6) - Complex Between the Barley Alpha-Amylase/Subtilisin Inhibitor and the Subtilisin Savinase
Other atoms:
Cl (24);
Ca (4);
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3bx2 (Na: 2) - PUF4 Rna Binding Domain Bound to Ho Endonuclease Rna 3' Utr Recognition Sequence
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3bzl (Na: 1) - Crystal Structural of Native Escu C-Terminal Domain
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3c0s (Na: 1) - Uvde 3 Metals
Other atoms:
Mn (3);
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3c0v (Na: 2) - Crystal Structure of Cytokinin-Specific Binding Protein in Complex with Cytokinin and TA6BR12
Other atoms:
Br (60);
Ta (30);
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3c0w (Na: 1) - I-Scei in Complex with A Bottom Nicked Dna Substrate
Other atoms:
Ca (3);
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3c17 (Na: 11) - Hexagonal Crystal Structure of Precursor E. Coli Isoaspartyl Peptidase/L-Asparaginase (Ecaiii) with Active- Site T179A Mutation
Other atoms:
Cl (17);
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3c1q (Na: 1) - The Three-Dimensional Structure of the Cytoplasmic Domains of Epsf From the Type 2 Secretion System of Vibrio Cholerae
Other atoms:
Ca (2);
Cl (1);
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3c2k (Na: 2) - Dna Polymerase Beta with A Gapped Dna Substrate and Dumpnpp with Manganese in the Active Site
Other atoms:
Mn (5);
Cl (4);
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3c2l (Na: 2) - Ternary Complex of Dna Polymerase Beta with A C:Dapcpp Mismatch in the Active Site
Other atoms:
Mn (6);
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3c2m (Na: 6) - Ternary Complex of Dna Polymerase Beta with A G:Dapcpp Mismatch in the Active Site
Other atoms:
Mn (7);
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3c32 (Na: 2) - Crystal Structure of GLUR5 Ligand-Binding Core in Complex with Sodium at 1.72 Angstrom Resolution
Other atoms:
Cl (4);
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3c3v (Na: 1) - Crystal Structure of Peanut Major Allergen Ara H 3
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3c45 (Na: 1) - Human Dipeptidyl Peptidase IV/CD26 in Complex with A Fluoroolefin Inhibitor
Other atoms:
F (2);
Cl (2);
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3c4u (Na: 2) - Structure of Class II Fructose-Biphosphate Aldolase From Helicobacter Pylori
Other atoms:
Zn (2);
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3c52 (Na: 2) - Class II Fructose-1,6-Bisphosphate Aldolase From Helicobacter Pylori in Complex with Phosphoglycolohydroxamic Acid, A Competitive Inhibitor
Other atoms:
Zn (2);
Ca (2);
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3c5f (Na: 12) - Structure of A Binary Complex of the R517A Pol Lambda Mutant
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3c5g (Na: 8) - Structure of A Ternary Complex of the R517K Pol Lambda Mutant
Other atoms:
Mg (2);
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3c6v (Na: 1) - Crystal Structure of AU4130/APC7354, A Probable Enzyme From the Thermophilic Fungus Aspergillus Fumigatus
Other atoms:
Cl (1);
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3c7e (Na: 2) - Crystal Structure of A Glycoside Hydrolase Family 43 Arabinoxylan Arabinofuranohydrolase From Bacillus Subtilis.
Other atoms:
Ca (1);
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3c7f (Na: 2) - Crystal Structure of A Glycoside Hydrolase Family 43 Arabinoxylan Arabinofuranohydrolase From Bacillus Subtilis in Complex with Xylotriose.
Other atoms:
Ca (1);
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3c7g (Na: 2) - Crystal Structure of A Glycoside Hydrolase Family 43 Arabinoxylan Arabinofuranohydrolase From Bacillus Subtilis in Complex with Xylotetraose.
Other atoms:
Ca (1);
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3c7h (Na: 2) - Crystal Structure of Glycoside Hydrolase Family 43 Arabinoxylan Arabinofuranohydrolase From Bacillus Subtilis in Complex with Axos-4-0.5.
Other atoms:
Ca (1);
Page generated: Thu Dec 28 11:15:25 2023
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