Sodium in PDB 3bv8: Crystal Structure of the N-Terminal Domain of Tetrahydrodipicolinate Acetyltransferase From Staphylococcus Aureus

The structure of Crystal Structure of the N-Terminal Domain of Tetrahydrodipicolinate Acetyltransferase From Staphylococcus Aureus, PDB code: 3bv8 was solved by M.E.Cuff, E.Duggan, S.Clancy, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.66 / 1.75
Space group	P 63 2 2
Cell size a, b, c (Å), α, β, γ (°)	76.503, 76.503, 93.862, 90.00, 90.00, 120.00
R / Rfree (%)	17.5 / 19.7

The binding sites of Sodium atom in the Crystal Structure of the N-Terminal Domain of Tetrahydrodipicolinate Acetyltransferase From Staphylococcus Aureus (pdb code 3bv8). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of the N-Terminal Domain of Tetrahydrodipicolinate Acetyltransferase From Staphylococcus Aureus, PDB code: 3bv8:

Sodium binding site 1 out of 1 in the Crystal Structure of the N-Terminal Domain of Tetrahydrodipicolinate Acetyltransferase From Staphylococcus Aureus


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of the N-Terminal Domain of Tetrahydrodipicolinate Acetyltransferase From Staphylococcus Aureus within 5.0Å range: probe atom residue distance (Å) B Occ A:Na101 b:20.5 occ:0.80 O A:HOH121 2.2 18.9 1.0 O A:HOH108 2.3 16.2 1.0 O A:PHE20 2.3 16.9 1.0 OD1 A:ASN80 2.4 18.6 1.0 O A:HOH115 2.4 19.1 1.0 CG A:ASN80 3.4 18.2 1.0 C A:PHE20 3.5 17.9 1.0 O A:LYS18 3.5 23.0 1.0 O A:HOH103 3.8 11.9 0.5 CB A:ASN80 3.9 16.3 1.0 CA A:THR21 4.0 16.4 1.0 O A:ALA17 4.1 19.9 1.0 C A:LYS18 4.1 21.0 1.0 CA A:LYS18 4.1 20.8 1.0 CA A:ASN80 4.1 16.7 1.0 OG1 A:THR21 4.1 17.5 1.0 N A:THR21 4.2 16.4 1.0 O A:ASN80 4.4 17.3 1.0 N A:PHE20 4.6 19.1 1.0 CD A:PRO22 4.6 16.6 1.0 CB A:THR21 4.6 17.0 1.0 ND2 A:ASN80 4.6 16.2 1.0 CA A:PHE20 4.6 18.3 1.0 C A:ASN80 4.8 17.4 1.0 CG2 A:THR21 4.8 16.4 1.0 C A:ALA17 4.9 20.9 1.0 N A:LYS18 5.0 20.3 1.0 CB A:LYS18 5.0 20.8 1.0

M.E.Cuff, E.Duggan, S.Clancy, A.Joachimiak. Structure of the N-Terminal Domain of Tetrahydrodipicolinate Acetyltransferase From Staphylococcus Aureus. To Be Published.