Atomistry » Sodium » PDB 2qd8-2r22
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Sodium in PDB, part 41 (files: 1601-1640), PDB 2qd8-2r22

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 1601-1640 (PDB 2qd8-2r22).
  1. 2qd8 (Na: 1) - Hiv-1 Protease Mutant I84V with Potent Antiviral Inhibitor Grl-98065
    Other atoms: Cl (2);
  2. 2qei (Na: 2) - Crystal Structure Analysis of Leut Complexed with L-Alanine, Sodium, and Clomipramine
    Other atoms: Cl (2);
  3. 2qew (Na: 1) - Rat Cytosolic Pepck, in Complex with Manganese Ion.
    Other atoms: Mn (2);
  4. 2qex (Na: 86) - Negamycin Binds to the Wall of the Nascent Chain Exit Tunnel of the 50S Ribosomal Subunit
    Other atoms: Mg (116); K (2); Cd (5); Cl (22);
  5. 2qey (Na: 1) - Rat Cytosolic Pepck in Complex with Gtp
    Other atoms: Mn (3);
  6. 2qf1 (Na: 1) - Rat Cytosolic Pepck in Complex with Oxaloacetic Acid.
    Other atoms: Mn (2);
  7. 2qf2 (Na: 2) - Rat Cytosolic Pepck in Complex with Oxaloacetic Acid and Gdp.
    Other atoms: Mn (7);
  8. 2qfp (Na: 11) - Crystal Structure of Red Kidney Bean Purple Acid Phosphatase in Complex with Fluoride
    Other atoms: F (4); Zn (4); Fe (4);
  9. 2qhf (Na: 2) - Mycobacterium Tuberculosis Chorismate Synthase in Complex with Nca
    Other atoms: Cl (1);
  10. 2qju (Na: 2) - Crystal Structure of An Nss Homolog with Bound Antidepressant
    Other atoms: Cl (1);
  11. 2qjy (Na: 1) - Crystal Structure of Rhodobacter Sphaeroides Double Mutant with Stigmatellin and UQ2
    Other atoms: Sr (9); Fe (30); Cl (2);
  12. 2qk9 (Na: 1) - Human Rnase H Catalytic Domain Mutant D210N in Complex with 18-Mer Rna/Dna Hybrid
  13. 2qkf (Na: 1) - Crystal Structure of 3-Deoxy-D-Manno-Octulosonate 8- Phosphate Synthase (KDO8PS) From Neisseria Meningitidis
    Other atoms: Cl (5);
  14. 2qm2 (Na: 1) - Putative Hopj Type III Effector Protein From Vibrio Parahaemolyticus
    Other atoms: K (1);
  15. 2qmw (Na: 1) - The Crystal Structure of the Prephenate Dehydratase (Pdt) From Staphylococcus Aureus Subsp. Aureus MU50
  16. 2qnw (Na: 1) - Toxoplasma Gondii Apicoplast-Targeted Acyl Carrier Protein
    Other atoms: Zn (5);
  17. 2qoe (Na: 1) - Human Dipeptidyl Peptidase IV in Complex with A Triazolopiperazine-Based Beta Amino Acid Inhibitor
    Other atoms: F (12);
  18. 2qqu (Na: 1) - Crystal Structure of A Cell-Wall Invertase (D239A) From Arabidopsis Thaliana in Complex with Sucrose
    Other atoms: Zn (4);
  19. 2qqv (Na: 2) - Crystal Structure of A Cell-Wall Invertase (E203A) From Arabidopsis Thaliana in Complex with Sucrose
    Other atoms: Zn (4);
  20. 2qr7 (Na: 1) - 2.0A X-Ray Structure of C-Terminal Kinase Domain of P90 Ribosomal S6 Kinase 2: Se-Met Derivative
  21. 2qr8 (Na: 1) - 2.0A X-Ray Structure of C-Terminal Kinase Domain of P90 Ribosomal S6 Kinase 2 (RSK2)
  22. 2qsv (Na: 1) - Crystal Structure of Protein of Unknown Function From Porphyromonas Gingivalis W83
  23. 2qt9 (Na: 1) - Human Dipeptidyl Peptidase IV/CD26 in Complex with A 4-Aryl Cyclohexylalanine Inhibitor
    Other atoms: F (2);
  24. 2qtb (Na: 1) - Human Dipeptidyl Peptidase IV/CD26 in Complex with A 4-Aryl Cyclohexylalanine Inhibitor
    Other atoms: F (4);
  25. 2qv6 (Na: 4) - Gtp Cyclohydrolase III From M. Jannaschii (MJ0145) Complexed with Gtp and Metal Ions
    Other atoms: K (4); Ca (4);
  26. 2qw1 (Na: 2) - Glucose/Galactose Binding Protein Bound to 3-O-Methyl D- Glucose
    Other atoms: Ca (1);
  27. 2qwl (Na: 4) - Crystal Structure of Bovine HSC70 (1-394AA)in the Adp State
    Other atoms: Mg (2);
  28. 2qwm (Na: 4) - Crystal Structure of Bovine HSC70 (1-394AA)in the Adp*VI State
    Other atoms: Mg (2); V (2);
  29. 2qwn (Na: 2) - Crystal Structure of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-386AA)R171C and Bovine Auxilin (810-910AA) D876C in the Adp*Pi State
    Other atoms: Mg (1);
  30. 2qwo (Na: 2) - Crystal Structure of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-394AA)R171C and Bovine Auxilin (810-910AA) D876C in the Adp*Pi Form #1
    Other atoms: Mg (1);
  31. 2qwp (Na: 2) - Crystal Structure of Disulfide-Bond-Crosslinked Complex of Bovine HSC70 (1-394AA)R171C and Bovine Auxilin (810-910AA) D876C in the Adp*Pi Form #2
    Other atoms: Mg (1);
  32. 2qxf (Na: 1) - Product Bound Structure of Exonuclease I at 1.5 Angstrom Resolution
    Other atoms: Mg (2);
  33. 2qz2 (Na: 1) - Crystal Structure of A Glycoside Hydrolase Family 11 Xylanase From Aspergillus Niger in Complex with Xylopentaose
  34. 2qz7 (Na: 7) - The Crystal Structure of A Homologue of Telluride Resistance Protein (Terd), SCO6318 From Streptomyces Coelicolor A3(2)
  35. 2qzi (Na: 7) - The Crystal Structure of A Conserved Protein of Unknown Function From Streptococcus Thermophilus Lmg 18311.
  36. 2r0w (Na: 1) - PFA2 Fab Complexed with ABETA1-8
  37. 2r1s (Na: 5) - Structure of the Rna Brominated Tridecamer R(Gcguu- 5BUGAAACGC) at 1.4 A (BR1)
    Other atoms: Br (2); Mg (1);
  38. 2r20 (Na: 5) - Structure of the Rna Brominated Tridecamer R(Gcguu- 5BUGAAACGC) at 1.3 A (BR2)
    Other atoms: Br (2); Mg (1);
  39. 2r21 (Na: 4) - Structure of the Rna Brominated Tridecamer R(Gcguu- 5BUGAAACGC) at 1.6 A (Brmn)
    Other atoms: Br (2); Mn (1);
  40. 2r22 (Na: 4) - Structure of the Native Rna Tridecamer R(Gcguuugaaacgc) at 1.5 A (Natmn)
    Other atoms: Mn (1);
Page generated: Fri Dec 24 09:40:30 2021

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