Sodium in PDB 2qsv: Crystal Structure of Protein of Unknown Function From Porphyromonas Gingivalis W83

The structure of Crystal Structure of Protein of Unknown Function From Porphyromonas Gingivalis W83, PDB code: 2qsv was solved by T.A.Binkowski, E.Duggan, M.Shui, A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.42 / 2.10
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	107.237, 107.237, 59.833, 90.00, 90.00, 120.00
R / Rfree (%)	20.4 / 23.3

The binding sites of Sodium atom in the Crystal Structure of Protein of Unknown Function From Porphyromonas Gingivalis W83 (pdb code 2qsv). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Protein of Unknown Function From Porphyromonas Gingivalis W83, PDB code: 2qsv:

Sodium binding site 1 out of 1 in the Crystal Structure of Protein of Unknown Function From Porphyromonas Gingivalis W83


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Protein of Unknown Function From Porphyromonas Gingivalis W83 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na222 b:42.4 occ:1.00 O A:HOH397 2.1 54.1 1.0 O A:HOH394 2.5 63.4 1.0 O A:HOH350 2.6 54.9 1.0 O A:ASN159 2.6 25.3 1.0 O A:LEU162 2.8 24.0 1.0 OG1 A:THR157 2.8 27.1 1.0 C A:ASN159 3.5 26.1 1.0 O A:THR157 3.7 27.1 1.0 CB A:THR157 3.7 23.6 1.0 C A:THR157 3.9 25.5 1.0 C A:LEU162 4.0 24.5 1.0 CA A:PRO160 4.0 25.9 1.0 N A:PRO160 4.1 25.9 1.0 C A:ARG158 4.2 27.7 1.0 N A:ASN159 4.2 26.8 1.0 O A:ARG158 4.4 30.1 1.0 CA A:THR157 4.4 24.5 1.0 N A:ARG158 4.4 25.7 1.0 CA A:ASN159 4.5 25.8 1.0 C A:PRO160 4.5 24.9 1.0 N A:LEU162 4.6 25.0 1.0 CA A:ARG158 4.7 27.8 1.0 CG2 A:THR163 4.8 28.9 1.0 O A:HOH279 4.8 33.4 1.0 O A:PRO160 4.8 24.9 1.0 CA A:LEU162 4.8 25.0 1.0 O A:HOH253 4.8 34.6 1.0 N A:THR163 5.0 24.2 1.0

T.A.Binkowski, E.Duggan, M.Shui, A.Joachimiak. Protein of Unknown Function From Porphyromonas Gingivalis W83. To Be Published.