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Sodium in PDB, part 239 (files: 9521-9560), PDB 7cmz-7dct

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 9521-9560 (PDB 7cmz-7dct).
  1. 7cmz (Na: 1) - Crystal Structure of BRCT7/8 in Complex with the Aps Motif of PHF8
    Other atoms: K (1);
  2. 7cn7 (Na: 3) - T4 Phage Spackle Protein GP61.3 Complex with Lysozyme Domain of GP5 Tail Lysozyme
    Other atoms: Cl (1);
  3. 7cnw (Na: 2) - Crystal Structure of Apo Psd From E. Coli (1.90 A)
  4. 7cod (Na: 1) - Post Insertion Complex of Dna Polymerase Mu (K438A/Q441A) with 1-Nt Gapped Dna
    Other atoms: Mg (3);
  5. 7coh (Na: 2) - Dimeric Form of Bovine Heart Cytochrome C Oxidase in the Fully Oxidized State
    Other atoms: Mg (2); Zn (2); Fe (4); Cu (6);
  6. 7cp5 (Na: 4) - Bovine Heart Cytochrome C Oxidase in A Catalytic Intermediate of E at 1.76 Angstrom Resolution
    Other atoms: Cu (6); Fe (4); Mg (2); Zn (2);
  7. 7cqo (Na: 1) - Lysozyme Grown in Lcp Soaked with Selenourea For 6 Min
    Other atoms: Cl (5);
  8. 7cre (Na: 1) - Hnrnpk KH3 Domain in Complex with A Ssdna Fragment From the Sirloin Element
  9. 7cuc (Na: 2) - Crystal Structure of Urate Oxidase From Bacillus Sp. Tb-90 in the Absence From Chloride Anion at 1.44 A Resolution
  10. 7cuf (Na: 2) - Crystal Structure of Urate Oxidase From Bacillus Sp. Tb-90 in the Absence From Chloride Anion at 1.44 A Resolution
  11. 7cug (Na: 1) - Crystal Structure of Urate Oxidase From Bacillus Sp. Tb-90 in the Absence From Chloride Anion at 1.62 A Resolution
  12. 7cvj (Na: 1) - Crystal Structure of Lysozyme By Fixed-Target Serial Synchrotron Crystallography (100 Ms)
    Other atoms: Cl (2);
  13. 7cvl (Na: 1) - Crystal Structure of Lysozyme By Fixed-Target Serial Synchrotron Crystallography (500 Ms)
    Other atoms: Cl (2);
  14. 7cw1 (Na: 1) - Crystal Structure of A Biodegradable Plastic-Degrading Cutinase-Like Enzyme From the Phyllosphere Yeast, Pseudozyma Antarctica, Solved By Getting the Phase From Anomalous Scattering of Uncovalently Coordinated Arsenic (Cacodylate).
    Other atoms: As (2);
  15. 7cy1 (Na: 1) - Crystal Structure of Mglc From Myxococcus Xanthus
  16. 7cy3 (Na: 4) - Crystal Structure of A Biodegradable Plastic-Degrading Cutinase From Paraphoma Sp. B47-9.
    Other atoms: As (4);
  17. 7cy9 (Na: 4) - Crystal Structure of A Biodegradable Plastic-Degrading Cutinase From Paraphoma Sp. B47-9 Solved By Getting the Phase From Anomalous Scattering of Uncovalently Coordinated Arsenic (Cacodylate).
    Other atoms: As (3);
  18. 7cyf (Na: 3) - Cryo-Em Structure of Bicarbonate Transporter Sbta in Complex with Pii- Like Signaling Protein Sbtb From Synechocystis Sp. Pcc 6803
  19. 7d0x (Na: 160) - uc(Nmr) Solution Structures of the Dna Minidumbbell Formed By 5'- Mcttgxmcttg-3'
  20. 7d0y (Na: 100) - uc(Nmr) Solution Structures of the Dna Minidumbbell Formed By Two Cmctg Repeats at pH 5
  21. 7d0z (Na: 100) - uc(Nmr) Solution Structures of the Dna Minidumbbell Formed By Two Cctg Repeats at pH 5
  22. 7d12 (Na: 75) - uc(Nmr) Solution Structures of Cag Rna-DB213 Binding Complex
  23. 7d18 (Na: 1) - Crystal Structure of Acidobacteriales Bacterium Glutaminyl Cyclase
    Other atoms: Zn (1);
  24. 7d2a (Na: 1) - CBM32 of Alyq in Complex with 4,5-Unsaturated Mannuronic Acid
    Other atoms: Ca (1);
  25. 7d2r (Na: 1) - Crystal Structure of Agrobacterium Tumefaciens Aconitase X Mutant - S449C/C510V
    Other atoms: Fe (2);
  26. 7d3e (Na: 4) - Cryo-Em Structure of Human DUOX1-DUOXA1 in Low-Calcium State
    Other atoms: Fe (4);
  27. 7d3f (Na: 4) - Cryo-Em Structure of Human DUOX1-DUOXA1 in High-Calcium State
    Other atoms: Fe (4); Ca (4);
  28. 7d48 (Na: 1) - Apo-Form Cyclic Trinucleotide Synthase Cdnd
  29. 7d5b (Na: 2) - BACE2 Xaperone Complex with N-{3-[(5R)-3-Amino-2,5-Dimethyl-1,1-Dioxo- 5,6-Dihydro-2H-1LAMBDA6,2,4-Thiadiazin-5-Yl]-4-Fluorophenyl}-5- Fluoropyridine-2-Carboxamide
    Other atoms: Cl (1); F (2);
  30. 7d5e (Na: 1) - Left-Handed G-Quadruplex Containing Two Bulges
    Other atoms: K (7);
  31. 7d5w (Na: 4) - Bovine Heart Cytochrome C Oxidase in A Catalytic Intermediate of O at 1.84 Angstrom Resolution
    Other atoms: Cu (6); Fe (4); Mg (2); Zn (2);
  32. 7d5x (Na: 4) - Bovine Heart Cytochrome C Oxidase in A Catalytic Intermediate, IO10, at 1.74 Angstrom Resolution
    Other atoms: Zn (2); Mg (2); Fe (4); Cu (6);
  33. 7d78 (Na: 1) - The Structure of Thioesterase Dcsb
    Other atoms: Cl (2);
  34. 7d79 (Na: 1) - The Structure of Dcsb Complex with Its Substrate Analogue
    Other atoms: Cl (4);
  35. 7d93 (Na: 2) - Crystal Structure of the Na+,K+-Atpase in the E2P State with Bound MG2+ and Anthroylouabain (P2(1)2(1)2(1) Symmetry)
    Other atoms: Mg (4);
  36. 7d94 (Na: 2) - Crystal Structure of the Na+,K+-Atpase in the E2P State with Bound One MG2+ and One Rb+ in the Presence of Bufalin
    Other atoms: Mg (4); Rb (2);
  37. 7dci (Na: 1) - Crystal Structure of HSF2 Dna-Binding Domain in Complex with 2-Site Hse Dna in the Head-to-Head Orientation
  38. 7dcj (Na: 2) - Crystal Structure of HSF1 Dna-Binding Domain in Complex with 2-Site Hse Dna in the Head-to-Head Orientation
  39. 7dcs (Na: 5) - Crystal Structure of HSF1 Dna-Binding Domain in Complex with 3-Site Hse Dna (23 Bp)
  40. 7dct (Na: 2) - Crystal Structure of HSF1 Dna-Binding Domain in Complex with 3-Site Hse Dna (24 Bp)
Page generated: Fri Dec 24 09:55:33 2021

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