Sodium in PDB 7ch1: The Overall Structure of SLC26A9

Other elements in 7ch1:

The structure of The Overall Structure of SLC26A9 also contains other interesting chemical elements:

Chlorine (Cl) 4 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the The Overall Structure of SLC26A9 (pdb code 7ch1). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the The Overall Structure of SLC26A9, PDB code: 7ch1:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in 7ch1

Go back to Sodium Binding Sites List in 7ch1
Sodium binding site 1 out of 2 in the The Overall Structure of SLC26A9


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of The Overall Structure of SLC26A9 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na803

b:30.0
occ:1.00
OE1 A:GLN85 2.2 61.5 1.0
OG1 A:THR127 3.0 58.5 1.0
CD A:GLN85 3.1 61.5 1.0
CG A:GLN85 3.4 61.5 1.0
N A:THR127 3.5 58.5 1.0
OG A:SER107 3.5 59.3 1.0
O A:HOH930 3.7 30.0 1.0
O A:GLN85 3.8 61.5 1.0
CA A:GLY89 4.0 62.0 1.0
N A:GLY89 4.1 62.0 1.0
CA A:GLY126 4.1 57.0 1.0
CB A:THR127 4.1 58.5 1.0
CA A:GLN85 4.2 61.5 1.0
CB A:GLN85 4.2 61.5 1.0
NE2 A:GLN85 4.2 61.5 1.0
CB A:ALA390 4.3 58.3 1.0
C A:GLY126 4.3 57.0 1.0
CA A:THR127 4.3 58.5 1.0
CB A:SER107 4.5 59.3 1.0
C A:GLN85 4.5 61.5 1.0
CG2 A:THR127 4.5 58.5 1.0
C A:GLN88 4.5 63.8 1.0
O A:THR127 4.5 58.5 1.0
O A:GLN88 4.8 63.8 1.0
CG2 A:VAL393 4.9 58.6 1.0
C A:THR127 4.9 58.5 1.0

Sodium binding site 2 out of 2 in 7ch1

Go back to Sodium Binding Sites List in 7ch1
Sodium binding site 2 out of 2 in the The Overall Structure of SLC26A9


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of The Overall Structure of SLC26A9 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Na803

b:30.0
occ:1.00
OE1 B:GLN85 2.2 61.5 1.0
OG1 B:THR127 3.0 58.5 1.0
CD B:GLN85 3.1 61.5 1.0
CG B:GLN85 3.4 61.5 1.0
N B:THR127 3.5 58.5 1.0
OG B:SER107 3.5 59.3 1.0
O B:HOH930 3.7 30.0 1.0
O B:GLN85 3.8 61.5 1.0
CA B:GLY89 4.0 62.0 1.0
N B:GLY89 4.1 62.0 1.0
CA B:GLY126 4.1 57.0 1.0
CB B:THR127 4.1 58.5 1.0
CA B:GLN85 4.2 61.5 1.0
CB B:GLN85 4.2 61.5 1.0
NE2 B:GLN85 4.2 61.5 1.0
CB B:ALA390 4.3 58.3 1.0
C B:GLY126 4.3 57.0 1.0
CA B:THR127 4.3 58.5 1.0
CB B:SER107 4.5 59.3 1.0
C B:GLN85 4.5 61.5 1.0
CG2 B:THR127 4.5 58.5 1.0
C B:GLN88 4.5 63.8 1.0
O B:THR127 4.5 58.5 1.0
O B:GLN88 4.8 63.8 1.0
CG2 B:VAL393 4.9 58.6 1.0
C B:THR127 4.9 58.5 1.0

Reference:

X.Chi, X.Jin, Y.Chen, X.Lu, X.Tu, X.Li, Y.Zhang, J.Lei, J.Huang, Z.Huang, Q.Zhou, X.Pan. Structural Insights Into the Gating Mechanism of Human SLC26A9 Mediated By Its C-Terminal Sequence. Cell Discov V. 6 55 2020.
ISSN: ESSN 2056-5968
PubMed: 32818062
DOI: 10.1038/S41421-020-00193-7
Page generated: Tue Dec 15 17:40:53 2020

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