Sodium in PDB 7cmz: Crystal Structure of BRCT7/8 in Complex with the Aps Motif of PHF8

Enzymatic activity of Crystal Structure of BRCT7/8 in Complex with the Aps Motif of PHF8

All present enzymatic activity of Crystal Structure of BRCT7/8 in Complex with the Aps Motif of PHF8:
1.14.11.27; 1.14.11.65;

Protein crystallography data

The structure of Crystal Structure of BRCT7/8 in Complex with the Aps Motif of PHF8, PDB code: 7cmz was solved by S.Y.Che, S.Ma, C.Cao, Z.Yao, L.Shi, N.Yang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	34.52 / 1.70
*Space group*	P 2₁ 2₁ 2₁
*Cell size a, b, c (Å), α, β, γ (°)*	54.517, 60.35, 66.03, 90, 90, 90
*R / R_free (%)*	17.8 / 21.5

Other elements in 7cmz:

The structure of Crystal Structure of BRCT7/8 in Complex with the Aps Motif of PHF8 also contains other interesting chemical elements:

Potassium

(K)

1 atom

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of BRCT7/8 in Complex with the Aps Motif of PHF8 (pdb code 7cmz). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of BRCT7/8 in Complex with the Aps Motif of PHF8, PDB code: 7cmz:

Sodium binding site 1 out of 1 in 7cmz

Go back to

Sodium Binding Sites List in 7cmz

Sodium binding site 1 out of 1 in the Crystal Structure of BRCT7/8 in Complex with the Aps Motif of PHF8

Mono view

Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of BRCT7/8 in Complex with the Aps Motif of PHF8 within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Na1502 b:25.3 occ:1.00	N	A:GLU1296	3.2	16.6	1.0
	CG	A:GLU1296	3.4	29.5	1.0
	N	A:LYS1297	3.8	16.7	1.0
	CA	A:ILE1295	3.9	14.1	1.0
	C	A:ILE1295	4.0	16.2	1.0
	OE2	A:GLU1296	4.1	35.4	1.0
	CA	A:GLU1296	4.1	18.9	1.0
	CG2	A:ILE1295	4.2	18.1	1.0
	CD	A:GLU1296	4.2	35.3	1.0
	CG	A:LYS1297	4.2	25.8	1.0
	O	A:VAL1294	4.3	13.7	1.0
	CB	A:GLU1296	4.3	23.4	1.0
	CE	A:LYS1297	4.4	28.9	1.0
	C	A:GLU1296	4.4	16.9	1.0
	CD	A:LYS1297	4.5	27.1	1.0
	CB	A:ILE1295	4.5	17.3	1.0
	CB	A:LYS1297	4.6	21.8	1.0
	O	A:HOH1640	4.7	31.8	1.0
	CA	A:LYS1297	4.8	18.4	1.0
	N	A:ILE1295	5.0	13.4	1.0
	CG1	A:ILE1295	5.0	17.1	1.0
	O	A:HOH1706	5.0	17.9	1.0
	O	A:HOH1616	5.0	27.8	1.0

Reference:

S.Y.Che, S.Ma, C.Cao, Z.Yao, L.Shi, N.Yang. Crystal Structure of BRCT7/8 in Complex with the Aps Motif of PHF8 To Be Published.

Page generated: Tue Oct 8 16:23:23 2024

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