Sodium in PDB 7cfs: Cryo-Em Strucutre of Human Acid-Sensing Ion Channel 1A at pH 8.0

The binding sites of Sodium atom in the Cryo-Em Strucutre of Human Acid-Sensing Ion Channel 1A at pH 8.0 (pdb code 7cfs). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Cryo-Em Strucutre of Human Acid-Sensing Ion Channel 1A at pH 8.0, PDB code: 7cfs:

Sodium binding site 1 out of 1 in the Cryo-Em Strucutre of Human Acid-Sensing Ion Channel 1A at pH 8.0


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Cryo-Em Strucutre of Human Acid-Sensing Ion Channel 1A at pH 8.0 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na604 b:20.0 occ:1.00 OD1 A:ASP434 2.3 73.9 1.0 OD1 B:ASP434 2.3 75.0 1.0 OD1 C:ASP434 2.3 73.7 1.0 OD2 A:ASP434 2.8 73.9 1.0 OD2 B:ASP434 2.8 75.0 1.0 OD2 C:ASP434 2.8 73.7 1.0 CG A:ASP434 2.9 73.9 1.0 CG B:ASP434 2.9 75.0 1.0 CG C:ASP434 2.9 73.7 1.0 CB A:ASP434 4.3 73.9 1.0 CB B:ASP434 4.3 75.0 1.0 CB C:ASP434 4.4 73.7 1.0 N A:ASP434 4.9 73.9 1.0 CA A:ASP434 4.9 73.9 1.0 CA B:ASP434 4.9 75.0 1.0 N B:ASP434 4.9 75.0 1.0 CA C:ASP434 4.9 73.7 1.0 N C:ASP434 4.9 73.7 1.0

D.Sun, S.Liu, S.Li, M.Zhang, F.Yang, M.Wen, P.Shi, T.Wang, M.Pan, S.Chang, X.Zhang, L.Zhang, C.Tian, L.Liu. Structural Insights Into Human Acid-Sensing Ion Channel 1A Inhibition By Snake Toxin MAMBALGIN1. Elife V. 9 2020.
ISSN: ESSN 2050-084X
PubMed: 32915133
DOI: 10.7554/ELIFE.57096