Sodium in PDB, part 67 (files: 2641-2680),
PDB 3iwf-3k93
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 2641-2680 (PDB 3iwf-3k93).
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3iwf (Na: 1) - The Crystal Structure of the N-Terminal Domain of A Rpir Transcriptional Regulator From Staphylococcus Epidermidis to 1.4A
Other atoms:
Ni (2);
Cl (2);
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3iwj (Na: 2) - Crystal Structure of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (PSAMADH2)
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3iwk (Na: 12) - Crystal Structure of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (PSAMADH1)
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3j4p (Na: 1) - Electron Microscopy Analysis of A Disaccharide Analog Complex Reveals Receptor Interactions of Adeno-Associated Virus
Other atoms:
Mg (1);
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3j7t (Na: 1) - Calcium Atpase Structure with Two Bound Calcium Ions Determined By Electron Crystallography of Thin 3D Crystals
Other atoms:
Ca (2);
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3jpo (Na: 3) - Ternary Complex of Dna Polymerase Beta with A Dideoxy Terminated Primer and 2'-Deoxyguanosine 5'-Beta, Gamma-Monochloromethylene Triphosphate
Other atoms:
Mg (1);
Cl (5);
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3jpp (Na: 4) - Ternary Complex of Dna Polymerase Beta with A Dideoxy Terminated Primer and 2'-Deoxyguanosine 5'-Beta, Gamma-Monomethyl Methylene Triphosphate
Other atoms:
Mg (1);
Cl (4);
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3jpq (Na: 3) - Ternary Complex of Dna Polymerase Beta with A Dideoxy Terminated Primer and 2'-Deoxyguanosine 5'-Beta, Gamma-Monobromo Methylene Triphosphate
Other atoms:
Br (2);
Mg (1);
Cl (3);
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3jpr (Na: 3) - Ternary Complex of Dna Polymerase Beta with A Dideoxy Terminated Primer and 2'-Deoxyguanosine 5'-Beta, Gamma-Dimethyl Methylene Triphosphate
Other atoms:
Mg (1);
Cl (3);
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3jps (Na: 3) - Ternary Complex of Dna Polymerase Beta with A Dideoxy Terminated Primer and 2'-Deoxyguanosine 5'-Beta, Gamma-Fluoro Methyl Methylene Triphosphate
Other atoms:
F (1);
Mg (1);
Cl (3);
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3jpt (Na: 3) - Ternary Complex of Dna Polymerase Beta with A Dideoxy Terminated Primer and 2'-Deoxyguanosine 5'-Beta, Gamma-Fluoro Chloro Methylene Triphosphate
Other atoms:
F (1);
Mg (1);
Cl (4);
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3jpw (Na: 1) - Crystal Structure of Amino Terminal Domain of the Nmda Receptor Subunit NR2B
Other atoms:
Cl (17);
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3jpy (Na: 1) - Crystal Structure of the Zinc-Bound Amino Terminal Domain of the Nmda Receptor Subunit NR2B
Other atoms:
Cl (5);
Zn (5);
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3jr7 (Na: 4) - The Crystal Structure of the Protein of Degv Family COG1307 with Unknown Function From Ruminococcus Gnavus Atcc 29149
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3js4 (Na: 4) - Crystal Structure of Iron Superoxide Dismutase From Anaplasma Phagocytophilum
Other atoms:
Fe (4);
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3js5 (Na: 1) - Crystal Structure of Protein Tyrosine Phosphatase From Entamoeba Histolytica with Hepes in the Active Site. High Resolution, Alternative Crystal Form with 1 Molecule in Asymmetric Unit
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3jtz (Na: 1) - Structure of the Arm-Type Binding Domain of Hpi Integrase
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3ju4 (Na: 1) - Crystal Structure Analysis of Endosialidasenf at 0.98 A Resolution
Other atoms:
Cl (5);
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3jvy (Na: 1) - Hiv-1 Protease Mutant G86A with Darunavir
Other atoms:
Cl (2);
-
3jw2 (Na: 1) - Hiv-1 Protease Mutant G86S with Darunavir
Other atoms:
Cl (1);
-
3jy9 (Na: 1) - Janus Kinase 2 Inhibitors
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3jz1 (Na: 2) - Crystal Structure of Human Thrombin Mutant N143P in E:Na+ Form
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3jzt (Na: 1) - Structure of A Cubic Crystal Form of X (Adrp) Domain From Fcov with Adp-Ribose
Other atoms:
Cl (2);
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3k04 (Na: 8) - Crystal Structure of Cng Mimicking Nak Mutant, Nak-Dtpp, Na+ Complex
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3k08 (Na: 10) - Crystal Structure of Cng Mimicking Nak Mutant, Nak-Ntpp, Na+ Complex
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3k0g (Na: 7) - Crystal Structure of Cng Mimicking Nak Mutant, Nak-Etpp, Na+ Complex
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3k13 (Na: 5) - Structure of the Pterin-Binding Domain Metr of 5- Methyltetrahydrofolate-Homocysteine Methyltransferase From Bacteroides Thetaiotaomicron
Other atoms:
K (2);
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3k1s (Na: 14) - Crystal Structure of the Pts Cellobiose Specific Enzyme Iia From Bacillus Anthracis
Other atoms:
Mg (3);
Cl (3);
-
3k1u (Na: 1) - Beta-Xylosidase, Family 43 Glycosyl Hydrolase From Clostridium Acetobutylicum
Other atoms:
Mg (3);
-
3k2l (Na: 1) - Crystal Structure of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (DYRK2)
Other atoms:
Cl (2);
-
3k2o (Na: 2) - Structure of An Oxygenase
Other atoms:
Ni (2);
Cl (6);
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3k2q (Na: 3) - Crystal Structure of Pyrophosphate-Dependent Phosphofructokinase From Marinobacter Aquaeolei, Northeast Structural Genomics Consortium Target MQR88
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3k3l (Na: 2) - Crystal Structure of Siderocalin (Ngal, Lipocalin 2) Complexed with Apo Enterobactin
Other atoms:
Cl (1);
-
3k4g (Na: 4) - Crystal Structure of E. Coli Rna Polymerase Alpha Subunit C-Terminal Domain
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3k55 (Na: 1) - Structure of Beta Hairpin Deletion Mutant of Beta Toxin From Staphylococcus Aureus
Other atoms:
Cl (3);
-
3k5i (Na: 1) - Crystal Structure of N5-Carboxyaminoimidazole Synthase From Aspergillus Clavatus in Complex with Adp and 5- Aminoimadazole Ribonucleotide
Other atoms:
Mg (4);
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3k6a (Na: 3) - Crystal Structure of Molybdenum Cofactor Biosynthesis Protein Mog From Shewanella Oneidensis
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3k6n (Na: 5) - Crystal Structure of the S225E Mutant KIR3.1 Cytoplasmic Pore Domain
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3k7f (Na: 1) - Crystal Structure Analysis of A Phenhexyl/Oxazole/Carboxypyridine Alpha-Ketoheterocycle Inhibitor Bound to A Humanized Variant of Fatty Acid Amide Hydrolase'
Other atoms:
Cl (1);
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3k93 (Na: 1) - Crystal Structure of Phage Related Exonuclease (YP_719632.1) From Haemophilus Somnus 129PT at 2.15 A Resolution
Other atoms:
Cl (2);
Page generated: Thu Dec 28 11:16:20 2023
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