Sodium in PDB 3j4p: Electron Microscopy Analysis of A Disaccharide Analog Complex Reveals Receptor Interactions of Adeno-Associated Virus

The structure of Electron Microscopy Analysis of A Disaccharide Analog Complex Reveals Receptor Interactions of Adeno-Associated Virus also contains other interesting chemical elements:

Magnesium

(Mg)

1 atom

The binding sites of Sodium atom in the Electron Microscopy Analysis of A Disaccharide Analog Complex Reveals Receptor Interactions of Adeno-Associated Virus (pdb code 3j4p). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Electron Microscopy Analysis of A Disaccharide Analog Complex Reveals Receptor Interactions of Adeno-Associated Virus, PDB code: 3j4p:

Sodium binding site 1 out of 1 in the Electron Microscopy Analysis of A Disaccharide Analog Complex Reveals Receptor Interactions of Adeno-Associated Virus


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Electron Microscopy Analysis of A Disaccharide Analog Complex Reveals Receptor Interactions of Adeno-Associated Virus within 5.0Å range: probe atom residue distance (Å) B Occ A:Na802 b:0.0 occ:0.35 O33 A:SCR801 3.0 0.0 0.4 C6 A:SCR801 3.8 0.0 0.4 C4 A:SCR801 3.8 0.0 0.4 S3 A:SCR801 3.8 0.0 0.4 O3 A:SCR801 3.9 0.0 0.4 O32 A:SCR801 3.9 0.0 0.4 O6 A:SCR801 4.2 0.0 0.4 C5 A:SCR801 4.3 0.0 0.4 C3 A:SCR801 4.4 0.0 0.4 O5 A:SCR801 4.5 0.0 0.4 O4 A:SCR801 4.7 0.0 0.4

Q.Xie, M.Spilman, N.L.Meyer, T.F.Lerch, S.M.Stagg, M.S.Chapman. Electron Microscopy Analysis of A Disaccharide Analog Complex Reveals Receptor Interactions of Adeno-Associated Virus. J.Struct.Biol. V. 184 129 2013.
ISSN: ISSN 1047-8477
PubMed: 24036405
DOI: 10.1016/J.JSB.2013.09.004