Atomistry » Sodium » PDB 3cq8-3dfh
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Sodium in PDB, part 57 (files: 2241-2280), PDB 3cq8-3dfh

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 2241-2280 (PDB 3cq8-3dfh).
  1. 3cq8 (Na: 3) - Ternary Complex of the L415F Mutant RB69 Exo(-)Polymerase
    Other atoms: Ca (6);
  2. 3cqb (Na: 2) - Crystal Structure of Heat Shock Protein Htpx Domain From Vibrio Parahaemolyticus Rimd 2210633
    Other atoms: Cl (1);
  3. 3cqx (Na: 4) - Chaperone Complex
  4. 3crn (Na: 4) - Crystal Structure of Response Regulator Receiver Domain Protein (Chey-Like) From Methanospirillum Hungatei Jf-1
  5. 3crp (Na: 1) - A Heterospecific Leucine Zipper Tetramer
  6. 3csv (Na: 1) - Crystal Structure of A Putative Aminoglycoside Phosphotransferase (YP_614837.1) From Silicibacter Sp. TM1040 at 2.15 A Resolution
    Other atoms: Zn (1); Cl (1);
  7. 3ctp (Na: 2) - Crystal Structure of Periplasmic Binding Protein/Laci Transcriptional Regulator From Alkaliphilus Metalliredigens Qymf Complexed with D-Xylulofuranose
  8. 3ctz (Na: 1) - Structure of Human Cytosolic X-Prolyl Aminopeptidase
    Other atoms: Mn (2); Ca (1);
  9. 3cx3 (Na: 2) - Crystal Structure Analysis of the Streptococcus Pneumoniae Adcaii Protein
    Other atoms: Zn (2);
  10. 3cx4 (Na: 2) - Crystal Structure of E.Coli Gs Mutant E377A in Complex with Adp and Oligosaccharides
  11. 3cxc (Na: 86) - The Structure of An Enhanced Oxazolidinone Inhibitor Bound to the 50S Ribosomal Subunit of H. Marismortui
    Other atoms: F (1); Mg (117); K (2); Cd (5); Cl (22);
  12. 3cyj (Na: 2) - Crystal Structure of A Mandelate Racemase/Muconate Lactonizing Enzyme-Like Protein From Rubrobacter Xylanophilus
  13. 3cym (Na: 2) - Crystal Structure of Protein BAD_0989 From Bifidobacterium Adolescentis
  14. 3cyx (Na: 1) - Crystal Structure of Hiv-1 Mutant I50V and Inhibitor Saquinavira
  15. 3czj (Na: 16) - "E. Coli (Lacz) Beta-Galactosidase (N460T) in Complex with D-Galctopyranosyl-1-One"
    Other atoms: Mg (9);
  16. 3d0p (Na: 1) - Insights Into Rna/Dna Hybrid Recognition and Processing By Rnase H From the Crystal Structure of A Non-Specific Enzyme-Dsdna Complex
  17. 3d1i (Na: 2) - Structure of the Complex A Hexameric Multiheme C Nitrite Reductase From the Extremophile Bacterium Thiolkalivibrio Nitratireducens with Nitrite Ion
    Other atoms: Fe (16); Ca (4);
  18. 3d1y (Na: 1) - Crystal Structure of Hiv-1 Mutant I54V and Inhibitor Saquina
    Other atoms: Cl (2);
  19. 3d20 (Na: 1) - Crystal Structure of Hiv-1 Mutant I54V and Inhibitor Darunavia
    Other atoms: Cl (2);
  20. 3d32 (Na: 1) - Complex of Gaba(A) Receptor-Associated Protein (Gabarap) with A Synthetic Peptide
    Other atoms: Cl (8);
  21. 3d49 (Na: 2) - Thrombin Inhibition
  22. 3d4l (Na: 1) - Human Dipeptidyl Peptidase IV/CD26 in Complex with A Novel Inhibitor
    Other atoms: F (4);
  23. 3d54 (Na: 3) - Stucture of Purlqs From Thermotoga Maritima
  24. 3d5k (Na: 9) - Crystal Structure of the Oprm Channel in A Non-Symmetrical Space Group
    Other atoms: Cl (1);
  25. 3d5t (Na: 1) - Crystal Structure of Malate Dehydrogenase From Burkholderia Pseudomallei
    Other atoms: Mg (1);
  26. 3d6a (Na: 4) - Crystal Structure of the 2H-Phosphatase Domain of Sts-2 in Complex with Tungstate.
    Other atoms: W (4); Mg (9);
  27. 3d76 (Na: 1) - Crystal Structure of A Pheromone Binding Protein Mutant D35N, From Apis Mellifera, Soaked at pH 7.0
  28. 3d77 (Na: 1) - Crystal Structure of A Pheromone Binding Protein Mutant D35N, From Apis Mellifera, Soaked at pH 4.0
  29. 3d7j (Na: 2) - SCO6650, A 6-Pyruvoyltetrahydropterin Synthase Homolog From Streptomyces Coelicolor
    Other atoms: Cl (3);
  30. 3d7r (Na: 2) - Crystal Structure of A Putative Esterase From Staphylococcus Aureus
    Other atoms: Br (2); Cl (2);
  31. 3d97 (Na: 2) - Crystal Structure of the R132K:R111L:L121E Mutant of Apo- Cellular Retinoic Acid Binding Protein Type II at 1.50 Angstroms Resolution
  32. 3d9r (Na: 1) - Crystal Structure of Ketosteroid Isomerase-Like Protein (YP_049581.1) From Erwinia Carotovora Atroseptica SCRI1043 at 2.40 A Resolution
  33. 3da9 (Na: 1) - Crystal Structure of Thrombin in Complex with Inhibitor
  34. 3dav (Na: 9) - Schizosaccharomyces Pombe Profilin Crystallized From Sodium Formate
  35. 3dbo (Na: 4) - Crystal Structure of A Member of the Vapbc Family of Toxin- Antitoxin Systems, Vapbc-5, From Mycobacterium Tuberculosis
  36. 3dc7 (Na: 2) - Crystal Structure of the Protein Q88SR8 From Lactobacillus Plantarum. Northeast Structural Genomics Consortium Target LPR109.
    Other atoms: Mg (1);
  37. 3ddk (Na: 9) - Coxsackievirus B3 3DPOL Rna Dependent Rna Polymerase
  38. 3ddr (Na: 2) - Structure of the Serratia Marcescens Hemophore Receptor Hasr-ILE671GLY Mutant in Complex with Its Hemophore Hasa and Heme
    Other atoms: Fe (2);
  39. 3deb (Na: 1) - Crystal Structure of Apo Form (Zinc Removed) of the Botulinum Neurotoxin Type C Light Chain
    Other atoms: Ca (1);
  40. 3dfh (Na: 3) - Crystal Structure of Putative Mandelate Racemase / Muconate Lactonizing Enzyme From Vibrionales Bacterium Swat-3
Page generated: Fri Dec 24 09:41:43 2021

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