Sodium in PDB, part 57 (files: 2241-2280),
PDB 3cq8-3dfh
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 2241-2280 (PDB 3cq8-3dfh).
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3cq8 (Na: 3) - Ternary Complex of the L415F Mutant RB69 Exo(-)Polymerase
Other atoms:
Ca (6);
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3cqb (Na: 2) - Crystal Structure of Heat Shock Protein Htpx Domain From Vibrio Parahaemolyticus Rimd 2210633
Other atoms:
Cl (1);
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3cqx (Na: 4) - Chaperone Complex
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3crn (Na: 4) - Crystal Structure of Response Regulator Receiver Domain Protein (Chey-Like) From Methanospirillum Hungatei Jf-1
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3crp (Na: 1) - A Heterospecific Leucine Zipper Tetramer
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3csv (Na: 1) - Crystal Structure of A Putative Aminoglycoside Phosphotransferase (YP_614837.1) From Silicibacter Sp. TM1040 at 2.15 A Resolution
Other atoms:
Zn (1);
Cl (1);
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3ctp (Na: 2) - Crystal Structure of Periplasmic Binding Protein/Laci Transcriptional Regulator From Alkaliphilus Metalliredigens Qymf Complexed with D-Xylulofuranose
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3ctz (Na: 1) - Structure of Human Cytosolic X-Prolyl Aminopeptidase
Other atoms:
Mn (2);
Ca (1);
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3cx3 (Na: 2) - Crystal Structure Analysis of the Streptococcus Pneumoniae Adcaii Protein
Other atoms:
Zn (2);
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3cx4 (Na: 2) - Crystal Structure of E.Coli Gs Mutant E377A in Complex with Adp and Oligosaccharides
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3cxc (Na: 86) - The Structure of An Enhanced Oxazolidinone Inhibitor Bound to the 50S Ribosomal Subunit of H. Marismortui
Other atoms:
F (1);
Mg (117);
K (2);
Cd (5);
Cl (22);
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3cyj (Na: 2) - Crystal Structure of A Mandelate Racemase/Muconate Lactonizing Enzyme-Like Protein From Rubrobacter Xylanophilus
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3cym (Na: 2) - Crystal Structure of Protein BAD_0989 From Bifidobacterium Adolescentis
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3cyx (Na: 1) - Crystal Structure of Hiv-1 Mutant I50V and Inhibitor Saquinavira
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3czj (Na: 16) - "E. Coli (Lacz) Beta-Galactosidase (N460T) in Complex with D-Galctopyranosyl-1-One"
Other atoms:
Mg (9);
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3d0p (Na: 1) - Insights Into Rna/Dna Hybrid Recognition and Processing By Rnase H From the Crystal Structure of A Non-Specific Enzyme-Dsdna Complex
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3d1i (Na: 2) - Structure of the Complex A Hexameric Multiheme C Nitrite Reductase From the Extremophile Bacterium Thiolkalivibrio Nitratireducens with Nitrite Ion
Other atoms:
Fe (16);
Ca (4);
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3d1y (Na: 1) - Crystal Structure of Hiv-1 Mutant I54V and Inhibitor Saquina
Other atoms:
Cl (2);
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3d20 (Na: 1) - Crystal Structure of Hiv-1 Mutant I54V and Inhibitor Darunavia
Other atoms:
Cl (2);
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3d32 (Na: 1) - Complex of Gaba(A) Receptor-Associated Protein (Gabarap) with A Synthetic Peptide
Other atoms:
Cl (8);
-
3d49 (Na: 2) - Thrombin Inhibition
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3d4l (Na: 1) - Human Dipeptidyl Peptidase IV/CD26 in Complex with A Novel Inhibitor
Other atoms:
F (4);
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3d54 (Na: 3) - Stucture of Purlqs From Thermotoga Maritima
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3d5k (Na: 9) - Crystal Structure of the Oprm Channel in A Non-Symmetrical Space Group
Other atoms:
Cl (1);
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3d5t (Na: 1) - Crystal Structure of Malate Dehydrogenase From Burkholderia Pseudomallei
Other atoms:
Mg (1);
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3d6a (Na: 4) - Crystal Structure of the 2H-Phosphatase Domain of Sts-2 in Complex with Tungstate.
Other atoms:
W (4);
Mg (9);
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3d76 (Na: 1) - Crystal Structure of A Pheromone Binding Protein Mutant D35N, From Apis Mellifera, Soaked at pH 7.0
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3d77 (Na: 1) - Crystal Structure of A Pheromone Binding Protein Mutant D35N, From Apis Mellifera, Soaked at pH 4.0
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3d7j (Na: 2) - SCO6650, A 6-Pyruvoyltetrahydropterin Synthase Homolog From Streptomyces Coelicolor
Other atoms:
Cl (3);
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3d7r (Na: 2) - Crystal Structure of A Putative Esterase From Staphylococcus Aureus
Other atoms:
Br (2);
Cl (2);
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3d97 (Na: 2) - Crystal Structure of the R132K:R111L:L121E Mutant of Apo- Cellular Retinoic Acid Binding Protein Type II at 1.50 Angstroms Resolution
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3d9r (Na: 1) - Crystal Structure of Ketosteroid Isomerase-Like Protein (YP_049581.1) From Erwinia Carotovora Atroseptica SCRI1043 at 2.40 A Resolution
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3da9 (Na: 1) - Crystal Structure of Thrombin in Complex with Inhibitor
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3dav (Na: 9) - Schizosaccharomyces Pombe Profilin Crystallized From Sodium Formate
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3dbo (Na: 4) - Crystal Structure of A Member of the Vapbc Family of Toxin- Antitoxin Systems, Vapbc-5, From Mycobacterium Tuberculosis
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3dc7 (Na: 2) - Crystal Structure of the Protein Q88SR8 From Lactobacillus Plantarum. Northeast Structural Genomics Consortium Target LPR109.
Other atoms:
Mg (1);
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3ddk (Na: 9) - Coxsackievirus B3 3DPOL Rna Dependent Rna Polymerase
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3ddr (Na: 2) - Structure of the Serratia Marcescens Hemophore Receptor Hasr-ILE671GLY Mutant in Complex with Its Hemophore Hasa and Heme
Other atoms:
Fe (2);
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3deb (Na: 1) - Crystal Structure of Apo Form (Zinc Removed) of the Botulinum Neurotoxin Type C Light Chain
Other atoms:
Ca (1);
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3dfh (Na: 3) - Crystal Structure of Putative Mandelate Racemase / Muconate Lactonizing Enzyme From Vibrionales Bacterium Swat-3
Page generated: Thu Dec 28 11:15:34 2023
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