Atomistry » Sodium » PDB 3c7o-3cpw
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Sodium in PDB, part 56 (files: 2201-2240), PDB 3c7o-3cpw

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 2201-2240 (PDB 3c7o-3cpw).
  1. 3c7o (Na: 2) - Crystal Structure of A Glycoside Hydrolase Family 43 Arabinoxylan Arabinofuranohydrolase From Bacillus Subtilis in Complex with Cellotetraose.
    Other atoms: Ca (1);
  2. 3c7t (Na: 1) - Crystal Structure of the Ecdysone Phosphate Phosphatase, Eppase, From Bombix Mori in Complex with Tungstate
    Other atoms: W (4); Mg (1); I (6); Cl (15);
  3. 3c7x (Na: 1) - Hemopexin-Like Domain of Matrix Metalloproteinase 14
    Other atoms: Cl (1);
  4. 3c87 (Na: 1) - Crystal Structure of the Enterobactin Esterase Fes From Shigella Flexneri in the Presence of Enterobactin
  5. 3c88 (Na: 1) - Crystal Structure of the Catalytic Domain of Botulinum Neurotoxin Serotype A with Inhibitory Peptide Rrgc
    Other atoms: Zn (1);
  6. 3c9f (Na: 4) - Crystal Structure of 5'-Nucleotidase From Candida Albicans SC5314
    Other atoms: Zn (2);
  7. 3cb8 (Na: 1) - 4FE-4S-Pyruvate Formate-Lyase Activating Enzyme in Complex with Adomet and A Peptide Substrate
    Other atoms: Fe (4);
  8. 3cbc (Na: 5) - Crystal Structure of Siderocalin (Ngal, Lipocalin 2) Y106F Complexed with Ferric Enterobactin
  9. 3cbt (Na: 3) - Crystal Structure of SC4828, A Unique Phosphatase From Streptomyces Coelicolor
    Other atoms: Mg (1);
  10. 3cc2 (Na: 86) - The Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution with Rrna Sequence For the 23S Rrna and Genome-Derived Sequences For R-Proteins
    Other atoms: Mg (116); K (2); Cd (5); Cl (22);
  11. 3cc4 (Na: 75) - Co-Crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit
    Other atoms: Sr (108); Mg (93); K (2); Cd (5); Cl (22);
  12. 3cc7 (Na: 75) - Structure of Anisomycin Resistant 50S Ribosomal Subunit: 23S Rrna Mutation C2487U
    Other atoms: Sr (108); Mg (93); K (2); Cd (5); Cl (22);
  13. 3cc9 (Na: 1) - Crystal Structure of Plasmodium Vivax Putative Polyprenyl Pyrophosphate Synthase in Complex with Geranylgeranyl Diphosphate
  14. 3cce (Na: 75) - Structure of Anisomycin Resistant 50S Ribosomal Subunit: 23S Rrna Mutation U2535A
    Other atoms: Sr (108); Mg (93); K (2); Cd (5); Cl (22);
  15. 3ccj (Na: 75) - Structure of Anisomycin Resistant 50S Ribosomal Subunit: 23S Rrna Mutation C2534U
    Other atoms: Sr (108); Mg (93); K (2); Cd (5); Cl (22);
  16. 3ccl (Na: 75) - Structure of Anisomycin Resistant 50S Ribosomal Subunit: 23S Rrna Mutation U2535C. Density For Anisomycin Is Visible But Not Included in Model.
    Other atoms: Sr (108); Mg (93); K (2); Cd (5); Cl (22);
  17. 3ccm (Na: 75) - Structure of Anisomycin Resistant 50S Ribosomal Subunit: 23S Rrna Mutation G2611U
    Other atoms: Sr (108); Mg (93); K (2); Cd (5); Cl (22);
  18. 3cco (Na: 1) - Structural Adaptation and Conservation in Quadruplex-Drug Recognition
    Other atoms: K (3);
  19. 3ccq (Na: 75) - Structure of Anisomycin Resistant 50S Ribosomal Subunit: 23S Rrna Mutation A2488U
    Other atoms: Sr (108); Mg (93); K (2); Cd (5); Cl (22);
  20. 3ccr (Na: 75) - Structure of Anisomycin Resistant 50S Ribosomal Subunit: 23S Rrna Mutation A2488C. Density For Anisomycin Is Visible But Not Included in the Model.
    Other atoms: Sr (108); Mg (93); K (2); Cd (5); Cl (22);
  21. 3ccs (Na: 75) - Structure of Anisomycin Resistant 50S Ribosomal Subunit: 23S Rrna Mutation G2482A
    Other atoms: Sr (108); Mg (93); K (2); Cd (5); Cl (22);
  22. 3ccu (Na: 75) - Structure of Anisomycin Resistant 50S Ribosomal Subunit: 23S Rrna Mutation G2482C
    Other atoms: Sr (108); Mg (93); K (2); Cd (5); Cl (22);
  23. 3ccv (Na: 75) - Structure of Anisomycin Resistant 50S Ribosomal Subunit: 23S Rrna Mutation G2616A
    Other atoms: Sr (108); Mg (93); K (2); Cd (5); Cl (22);
  24. 3cd6 (Na: 75) - Co-Cystal of Large Ribosomal Subunit Mutant G2616A with Cc- Puromycin
    Other atoms: Sr (107); Mg (93); K (2); Cd (5); Cl (22);
  25. 3cgl (Na: 2) - Crystal Structure and Raman Studies of DSFP483, A Cyan Fluorescent Protein From Discosoma Striata
  26. 3ci3 (Na: 1) - Structure of the Pduo-Type Atp:Co(I)Rrinoid Adenosyltransferase From Lactobacillus Reuteri Complexed with Partial Adenosylcobalamin and Pppi
    Other atoms: Co (1); Mg (1);
  27. 3cki (Na: 1) - Crystal Structure of the Tace-N-Timp-3 Complex
    Other atoms: Zn (1);
  28. 3cks (Na: 1) - Urate Oxidase Complexed with 8-Azaxanthine Under 4.0 Mpa Oxygen Pressure
  29. 3cku (Na: 1) - Urate Oxidase From Aspergillus Flavus Complexed with Its Inhibitor 8-Azaxanthin and Chloride
    Other atoms: Cl (1);
  30. 3clo (Na: 2) - Crystal Structure of Putative Transcriptional Regulator Containing A Luxr Dna Binding Domain (NP_811094.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.04 A Resolution
    Other atoms: Cl (7);
  31. 3cma (Na: 75) - The Structure of Cca and Cca-Phe-Cap-Bio Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
    Other atoms: Sr (107); Mg (93); K (2); Cd (5); Cl (22);
  32. 3cmb (Na: 12) - Crystal Structure of Acetoacetate Decarboxylase (YP_001047042.1) From Methanoculleus Marisnigri JR1 at 1.60 A Resolution
    Other atoms: Cl (4);
  33. 3cmd (Na: 8) - Crystal Structure of Peptide Deformylase From Vre-E.Faecium
    Other atoms: Fe (2);
  34. 3cme (Na: 75) - The Structure of Ca and Cca-Phe-Cap-Bio Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
    Other atoms: Sr (108); Mg (93); K (2); Cd (5); Cl (22);
  35. 3cmj (Na: 22) - Crystal Structure of Engineered Beta-Glucosidase From Soil Metagenome
  36. 3cmp (Na: 7) - Crystal Structure of Siderocalin (Ngal, Lipocalin 2) K125A Mutant Complexed with Ferric Enterobactin
    Other atoms: Fe (3);
  37. 3cng (Na: 2) - Crystal Structure of Nudix Hydrolase From Nitrosomonas Europaea
    Other atoms: Zn (4); Cl (7);
  38. 3cnh (Na: 2) - Crystal Structure of Predicted Hydrolase of Haloacid Dehalogenase-Like Superfamily (NP_295428.1) From Deinococcus Radiodurans at 1.66 A Resolution
  39. 3cpe (Na: 1) - Crystal Structure of T4 GP17
  40. 3cpw (Na: 75) - The Structure of the Antibiotic Linezolid Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
    Other atoms: F (1); Sr (108); Mg (92); K (2); Cd (5); Cl (22);
Page generated: Fri Dec 24 09:41:39 2021

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