Atomistry » Sodium » PDB 3c7o-3cpw » 3cki
Atomistry »
  Sodium »
    PDB 3c7o-3cpw »
      3cki »

Sodium in PDB 3cki: Crystal Structure of the Tace-N-Timp-3 Complex

Enzymatic activity of Crystal Structure of the Tace-N-Timp-3 Complex

All present enzymatic activity of Crystal Structure of the Tace-N-Timp-3 Complex:
3.4.24.86;

Protein crystallography data

The structure of Crystal Structure of the Tace-N-Timp-3 Complex, PDB code: 3cki was solved by M.Wisniewska, P.Goettig, K.Maskos, E.Belouski, D.Winters, R.Hecht, R.Black, W.Bode, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.59 / 2.30
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 70.447, 70.447, 156.728, 90.00, 90.00, 90.00
R / Rfree (%) 23.4 / 28.4

Other elements in 3cki:

The structure of Crystal Structure of the Tace-N-Timp-3 Complex also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of the Tace-N-Timp-3 Complex (pdb code 3cki). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of the Tace-N-Timp-3 Complex, PDB code: 3cki:

Sodium binding site 1 out of 1 in 3cki

Go back to Sodium Binding Sites List in 3cki
Sodium binding site 1 out of 1 in the Crystal Structure of the Tace-N-Timp-3 Complex


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of the Tace-N-Timp-3 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na502

b:35.7
occ:1.00
OD1 A:ASN389 2.2 34.8 1.0
OD1 A:ASP342 2.2 34.8 1.0
O A:HOH689 2.3 34.4 1.0
O A:HOH701 2.4 26.4 1.0
O A:PHE343 2.7 32.2 1.0
CG A:ASN389 3.3 30.8 1.0
CA A:ASN389 3.4 30.7 1.0
CG A:ASP342 3.5 34.1 1.0
N A:TYR390 3.6 32.4 1.0
CA A:GLY346 3.6 27.9 1.0
N A:PHE343 3.7 32.9 1.0
C A:PHE343 3.8 33.1 1.0
C A:ASP342 3.8 32.5 1.0
CB A:ASN389 3.8 30.7 1.0
N A:GLY346 3.9 33.2 1.0
CA A:ASP342 3.9 29.9 1.0
C A:ASN389 4.0 32.6 1.0
O A:LYS388 4.0 25.7 1.0
C A:GLY346 4.1 25.4 1.0
N A:THR347 4.3 25.3 1.0
CA A:PHE343 4.3 31.5 1.0
O A:THR347 4.3 19.7 1.0
CB A:ASP342 4.3 31.9 1.0
OD2 A:ASP342 4.3 41.7 1.0
O A:ASP342 4.4 31.2 1.0
ND2 A:ASN389 4.4 32.8 1.0
N A:ASN389 4.5 28.4 1.0
C A:LYS388 4.7 28.0 1.0
CA A:TYR390 4.7 35.6 1.0
CB A:PHE343 4.8 28.6 1.0
O A:GLY346 4.8 23.2 1.0
N A:ASP344 4.9 33.5 1.0
CD2 A:TYR390 5.0 42.3 1.0
CG A:TYR390 5.0 41.5 1.0

Reference:

M.Wisniewska, P.Goettig, K.Maskos, E.Belouski, D.Winters, R.Hecht, R.Black, W.Bode. Structural Determinants of the Adam Inhibition By Timp-3: Crystal Structure of the Tace-N-Timp-3 Complex. J.Mol.Biol. V. 381 1307 2008.
ISSN: ISSN 0022-2836
PubMed: 18638486
DOI: 10.1016/J.JMB.2008.06.088
Page generated: Tue Dec 15 06:07:03 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy