Sodium in PDB, part 32 (files: 1241-1280),
PDB 2fmp-2gg2
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 1241-1280 (PDB 2fmp-2gg2).
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2fmp (Na: 5) - Dna Polymerase Beta with A Terminated Gapped Dna Substrate and Ddctp with Sodium in the Catalytic Site
Other atoms:
Mg (1);
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2fmq (Na: 3) - Sodium in Active Site of Dna Polymerase Beta
Other atoms:
Mg (1);
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2fms (Na: 2) - Dna Polymerase Beta with A Gapped Dna Substrate and Dumpnpp with Magnesium in the Catalytic Site
Other atoms:
Mg (2);
Cl (4);
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2fpr (Na: 1) - Crystal Structure the N-Terminal Domain of E. Coli Hisb. Apo Mg Model.
Other atoms:
Mg (2);
Zn (2);
Br (7);
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2fqe (Na: 1) - Crystal Structures of E. Coli Laccase Cueo Under Different Copper Binding Situations
Other atoms:
Cu (4);
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2fqg (Na: 2) - Crystal Structures of E. Coli Laccase Cueo Under Different Copper Binding Situations
Other atoms:
Cu (4);
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2frs (Na: 4) - Crystal Structure of the F15W Mutant of Apo-Cellular Retinoic Acid Binding Protein Type II at 1.51 Angstroms Resolution
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2fs6 (Na: 1) - Crystal Structure of Apo-Cellular Retinoic Acid Binding Protein Type II at 1.35 Angstroms Resolution
Other atoms:
Cl (2);
-
2fsu (Na: 4) - Crystal Structure of the Phnh Protein From Escherichia Coli
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2ftl (Na: 1) - Crystal Structure of Trypsin Complexed with Bpti at 100K
Other atoms:
Ca (2);
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2ftm (Na: 1) - Crystal Structure of Trypsin Complexed with the Bpti Variant (TYR35->Gly)
Other atoms:
Ca (2);
-
2ftp (Na: 1) - Crystal Structure of Hydroxymethylglutaryl-Coa Lyase From Pseudomonas Aeruginosa
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2ftx (Na: 1) - Crystal Structure of the Yeast Kinetochore SPC24/SPC25 Globular Domain
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2fv7 (Na: 2) - Crystal Structure of Human Ribokinase
Other atoms:
Mg (2);
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2fw0 (Na: 3) - Apo Open Form of Glucose/Galactose Binding Protein
Other atoms:
Ca (1);
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2fwe (Na: 1) - Crystal Structure of the C-Terminal Domain of the Electron Transfer Catalyst Dsbd (Oxidized Form)
Other atoms:
Ni (1);
I (11);
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2fwf (Na: 2) - High Resolution Crystal Structure of the C-Terminal Domain of the Electron Transfer Catalyst Dsbd (Reduced Form)
Other atoms:
I (11);
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2fza (Na: 5) - Crystal Structure of D(Gcgggagc): the Base-Intercalated Duplex
Other atoms:
Br (2);
Ca (2);
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2g1u (Na: 1) - Crystal Structure of A Putative Transport Protein (TM1088A) From Thermotoga Maritima at 1.50 A Resolution
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2g2c (Na: 1) - Putative Molybdenum Cofactor Biosynthesis Protein From Corynebacterium Diphtheriae.
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2g4i (Na: 1) - Anomalous Substructure of Concanavalin A
Other atoms:
Mn (1);
Cl (3);
Ca (1);
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2g4t (Na: 1) - Anomalous Substructure of Porcine Pancreatic Elastase (Na)
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2g50 (Na: 12) - The Location of the Allosteric Amino Acid Binding Site of Muscle Pyruvate Kinase.
Other atoms:
K (8);
Mn (8);
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2g64 (Na: 2) - Structure of Caenorhabditis Elegans 6-Pyruvoyl Tetrahydropterin Synthase
Other atoms:
Zn (1);
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2g78 (Na: 1) - Crystal Structure of the R132K:Y134F Mutant of Cellular Retinoic Acid Binding Protein Type II in Complex with All- Trans-Retinoic Acid at 1.70 Angstroms Resolution
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2g79 (Na: 4) - Crystal Structure of the R132K:Y134F Mutant of Cellular Retinoic Acid Binding Protein Type II in Complex with All- Trans-Retinal at 1.69 Angstroms Resolution
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2g7b (Na: 2) - Crystal Structure of the R132K:R111L:L121E Mutant of Cellular Retinoic Acid Binding Protein Type II in Complex with All-Trans-Retinal at 1.18 Angstroms Resolution
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2g82 (Na: 1) - High Resolution Structures of Thermus Aquaticus Glyceraldehyde-3-Phosphate Dehydrogenase: Role of 220'S Loop Motion in Catalysis
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2g84 (Na: 1) - Cytidine and Deoxycytidylate Deaminase Zinc-Binding Region From Nitrosomonas Europaea.
Other atoms:
Zn (2);
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2ga4 (Na: 5) - STX2 with Adenine
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2gc4 (Na: 4) - Structural Comparison of the Oxidized Ternary Electron Transfer Complex of Methylamine Dehydrogenase, Amicyanin and Cytochrome C551I From Paracoccus Denitrificans with the Substrate-Reduced, Copper Free Complex at 1.9 A Resolution.
Other atoms:
Fe (4);
Cu (4);
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2gc7 (Na: 4) - Substrate Reduced, Copper Free Complex of Methylamine Dehydrogenase, Amicyanin and Cytochrome C551I From Paracoccus Denitrificans.
Other atoms:
Fe (4);
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2gde (Na: 1) - Thrombin in Complex with Inhibitor
Other atoms:
Cl (1);
-
2gdi (Na: 2) - Crystal Structure of Thiamine Pyrophosphate-Specific Riboswitch in Complex with Thiamine Pyrophosphate
Other atoms:
Mg (6);
K (3);
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2gep (Na: 1) - Sulfite Reductase Hemoprotein, Oxidized, Siroheme Feiii [4FE-4S] +2,Sulfite Complex
Other atoms:
Fe (5);
-
2gez (Na: 4) - Crystal Structure of Potassium-Independent Plant Asparaginase
Other atoms:
Cl (6);
-
2gfg (Na: 1) - Crystal Structure of Protein BH2851 (10175472) From Bacillus Halodurans at 2.12 A Resolution
Other atoms:
Cl (3);
-
2gfh (Na: 1) - Crystal Structure of Protein C20ORF147 Homolog (17391249) From Mus Musculus at 1.90 A Resolution
Other atoms:
Cl (1);
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2gg0 (Na: 1) - Novel Bacterial Methionine Aminopeptidase Inhibitors
Other atoms:
F (3);
Co (2);
-
2gg2 (Na: 1) - Novel Bacterial Methionine Aminopeptidase Inhibitors
Other atoms:
F (3);
Co (2);
Page generated: Thu Dec 28 11:13:41 2023
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