Sodium in the structure of Crystal Structure Of the R132K:Y134F Mutant of Cellular Retinoic Acid Binding Protein Type II in Complex With All- Trans-Retinoic Acid At 1.70 Angstroms Resolution (pdb 2g78)

The binding sites of Sodium atom in the structure of Crystal Structure Of the R132K:Y134F Mutant of Cellular Retinoic Acid Binding Protein Type II in Complex With All- Trans-Retinoic Acid At 1.70 Angstroms Resolution (pdb code 2g78). This binding sites where shown with 5.0 Angstroms radius around Sodium atom. The 2g78 structure was solved by S.VAEZESLAMI, J.H.GEIGER, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 39.7-1.7 Space group P212121 a (A) 44.702 b (A) 46.251 c (A) 77.553 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 14.5 Rfree (%) 20.3 Sodium Binding Sites: Sodium binding site 1 out of 1 in 2g78 Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Sodium in the PDB 2g78. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Pro1, A: Glu90, A: Hoh548, A: Hoh628, A: Hoh639, A: Hoh661, A: Hoh670, A: Hoh677, A: Hoh684, conact list: Atom Atom Distance (A) Na CD A:Pro1 4.09 Na O A:Glu90 4.39 Na CB A:Glu90 4.96 Na OE2 A:Glu90 4.77 Na CG A:Glu90 4.15 Na CA A:Glu90 4.72 Na O A:Hoh548 2.07 Na O A:Hoh628 4.88 Na O A:Hoh639 4.32 Na O A:Hoh661 2.86 Na O A:Hoh670 4.39 Na O A:Hoh677 2.15 Na O A:Hoh684 4.81 interactive model: