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Sodium in PDB 2ftp: Crystal Structure of Hydroxymethylglutaryl-Coa Lyase From Pseudomonas Aeruginosa

Enzymatic activity of Crystal Structure of Hydroxymethylglutaryl-Coa Lyase From Pseudomonas Aeruginosa

All present enzymatic activity of Crystal Structure of Hydroxymethylglutaryl-Coa Lyase From Pseudomonas Aeruginosa:
4.1.3.4;

Protein crystallography data

The structure of Crystal Structure of Hydroxymethylglutaryl-Coa Lyase From Pseudomonas Aeruginosa, PDB code: 2ftp was solved by T.Xiao, E.Evdokimova, Y.Liu, M.Kudritska, A.Savchenko, E.F.Pai, A.Edwards, Midwest Center For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 80.00 / 2.40
Space group I 4 3 2
Cell size a, b, c (Å), α, β, γ (°) 189.012, 189.012, 189.012, 90.00, 90.00, 90.00
R / Rfree (%) 18.7 / 21.3

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Hydroxymethylglutaryl-Coa Lyase From Pseudomonas Aeruginosa (pdb code 2ftp). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Hydroxymethylglutaryl-Coa Lyase From Pseudomonas Aeruginosa, PDB code: 2ftp:

Sodium binding site 1 out of 1 in 2ftp

Go back to Sodium Binding Sites List in 2ftp
Sodium binding site 1 out of 1 in the Crystal Structure of Hydroxymethylglutaryl-Coa Lyase From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Hydroxymethylglutaryl-Coa Lyase From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na3000

b:59.3
occ:1.00
OD1 A:ASP16 2.5 38.4 1.0
NE2 A:HIS209 2.5 31.1 1.0
NE2 A:HIS207 2.6 29.7 1.0
O A:HOH3187 2.9 43.7 1.0
OD1 A:ASN249 3.1 38.6 1.0
CE1 A:HIS209 3.2 31.9 1.0
CG A:ASP16 3.5 35.8 1.0
CD2 A:HIS207 3.6 28.1 1.0
CE1 A:HIS207 3.6 28.2 1.0
CD2 A:HIS209 3.7 30.1 1.0
OD2 A:ASP16 3.7 36.9 1.0
O A:HOH3132 4.0 48.1 1.0
CG A:ASN249 4.1 37.4 1.0
ND1 A:HIS209 4.4 31.8 1.0
CG2 A:THR179 4.5 29.0 1.0
ND2 A:ASN249 4.5 38.1 1.0
O A:HOH3111 4.5 59.5 1.0
O A:HOH3121 4.6 36.8 1.0
CG A:HIS209 4.7 30.1 1.0
ND1 A:HIS207 4.7 29.1 1.0
CG A:HIS207 4.7 27.4 1.0
CB A:ASP16 4.8 35.2 1.0
O A:HOH3133 4.9 41.5 1.0

Reference:

T.Xiao, E.Evdokimova, Y.Liu, M.Kudritska, A.Savchenko, E.F.Pai, A.Edwards. Crystal Structure of Hydroxymethylglutaryl-Coa Lyase From Pseudomonas Aeruginosa To Be Published.
Page generated: Tue Dec 15 05:49:14 2020

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