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Sodium in PDB, part 296 (files: 11801-11840), PDB 9doc-9ghx

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 11801-11840 (PDB 9doc-9ghx).
  1. 9doc (Na: 5) - The Von Willebrand Factor A Domain of Human Capillary Morphogenesis Gene II, Flexibly Fused to the 1TEL Crystallization Chaperone, Thr- Val Linker Variant, at 1.2 Angstrom Resolution
    Other atoms: Mg (7);
  2. 9dw6 (Na: 2) - Crystal Structure of Sars-Cov-2 Main Protease (Mpro) C145A Mutant in Complex with Peptide From Human Trna Methyltransferase TRMT1
    Other atoms: Cl (1);
  3. 9end (Na: 2) - Crystal Structure of Methanopyrus Kandleri Malate Dehydrogenase Mutant 3
    Other atoms: Cl (1);
  4. 9ent (Na: 3) - Ssx Structure of Autotaxin in Cryogenic Conditions
    Other atoms: Zn (2); Ca (1); I (15);
  5. 9eo4 (Na: 1) - Outward-Open Structure of Human Dopamine Transporter Bound to Cocaine
    Other atoms: Cl (1);
  6. 9epl (Na: 1) - Mpro From Sars-Cov-2 with 298Q Mutation
  7. 9eqh (Na: 1) - WWP2 WW2-2,3-Linker-Hect (WWP2-Lh)
  8. 9erv (Na: 1) - Structure of Salmonella Caprel Bound to BAS11 GP54
    Other atoms: Mg (1);
  9. 9etn (Na: 1) - Crystal Structure of Murine CRTAC1
    Other atoms: Ca (6); K (3);
  10. 9eu5 (Na: 2) - Ssx Structure of Autotaxin at Room Temperature
    Other atoms: I (15); Zn (9); Ca (1);
  11. 9eup (Na: 2) - Inhibitor-Free Outward-Open Structure of Drosophila Dopamine Transporter
    Other atoms: Cl (1);
  12. 9ewp (Na: 2) - Crystal Structure of Yeast E2 Ubiquitin-Conjugating Enzyme UBC6 Ubc Domain
    Other atoms: Cl (3); Cd (4);
  13. 9f7l (Na: 17) - Bartonella Henselae Nrnc Bound to Deoxy-Pgg
    Other atoms: Cl (2);
  14. 9f7m (Na: 10) - Blastococcus Orn Bound to Pgg
  15. 9f8x (Na: 3) - Low-Dose Structure of Marinobacter Nauticus Nitrous Oxide Reductase
    Other atoms: Ca (8); Cl (4); Cu (24);
  16. 9fcf (Na: 1) - Medicago Truncatula 5'-Profar Isomerase (HISN3) D57N Mutant in Complex with Profar
    Other atoms: Cl (1);
  17. 9fcg (Na: 2) - Medicago Truncatula 5'-Profar Isomerase (HISN3) D57N Mutant in Complex with Prfar
    Other atoms: Cl (2);
  18. 9fcq (Na: 1) - Cysg(N-16)-H122A Mutant in Complex with Sah From Kitasatospora Cystarginea
    Other atoms: Ca (1);
  19. 9fdj (Na: 8) - Crystal Structure of the Nuoef Variant R66G (Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions (Short Soak)
    Other atoms: Cl (4); Fe (12);
  20. 9fdk (Na: 7) - Crystal Structure of Oxidized Nuoef Variant R66G(Nuof) From Aquifex Aeolicus
    Other atoms: Cl (3); Fe (12);
  21. 9fdv (Na: 16) - Crystal Structure of Reduced Nuoef Variant R66G(Nuof) From Aquifex Aeolicus
    Other atoms: Fe (12); Cl (3);
  22. 9fe0 (Na: 9) - Crystal Structure of Reduced Nuoef Variant R66G(Nuof) From Aquifex Aeolicus Bound to Nad+
    Other atoms: Fe (12); Cl (6);
  23. 9fe5 (Na: 6) - Crystal Structure of Nuoef Variant R66G(Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions After 10 Min Soaking
    Other atoms: Fe (12); Cl (2);
  24. 9fe7 (Na: 11) - Crystal Structure of Oxidized Nuoef Variant P228R(Nuof) From Aquifex Aeolicus
    Other atoms: Fe (12); Cl (3);
  25. 9fe8 (Na: 8) - Crystal Structure of Reduced Nuoef Variant P228R(Nuof) From Aquifex Aeolicus
    Other atoms: Fe (12);
  26. 9fea (Na: 14) - Crystal Structure of Reduced Nuoef Variant P228R(Nuof) From Aquifex Aeolicus Bound to Nad+
    Other atoms: Fe (12); Cl (2);
  27. 9fi9 (Na: 1) - Human Pif + Z48847594 (Occupancy 0.7)
    Other atoms: Mg (1);
  28. 9fif (Na: 7) - Crystal Structure of Nuoef Variant P228R(Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions
    Other atoms: Fe (12);
  29. 9fih (Na: 10) - Crystal Structure of Nuoef Variant P228R(Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions After 10 Min Soaking
    Other atoms: Fe (12);
  30. 9fii (Na: 9) - Crystal Structure of Oxidized Nuoef Variant E222K(Nuof) From Aquifex Aeolicus
    Other atoms: Cl (5); Fe (12);
  31. 9fij (Na: 15) - Crystal Structure of Reduced Nuoef Variant E222K(Nuof) From Aquifex Aeolicus
    Other atoms: Fe (12); Cl (7);
  32. 9fil (Na: 10) - Crystal Structure of Reduced Nuoef Variant E222K(Nuof) From Aquifex Aeolicus Bound to Nad+
    Other atoms: Fe (12); Cl (3);
  33. 9fs3 (Na: 1) - Mutant S1538L of the Dihydroorotase Domain of Human Cad Protein Bound to Carbamoyl Aspartate
    Other atoms: Zn (4);
  34. 9fw2 (Na: 1) - Sars Cov-2 NSP10 in Complex with the Exon Domain From NSP14
    Other atoms: Zn (4);
  35. 9fym (Na: 2) - Lacto-N-Biosidase From Treponema Denticola Atcc 35405
    Other atoms: Zn (2);
  36. 9fz3 (Na: 3) - Crystal Structure of K38 Amylase From Bacillus Sp. Strain Ksm-K38 Covalently Bound to Alpha-1,6 Branched Pseudo-Trisaccharide Activity- Based Probe
  37. 9g34 (Na: 2) - The Hiv Protease Inhibitor Darunavir Binding to the Active Site of Cryphonectria Parasitica Endothiapepsin
  38. 9gcv (Na: 1) - Identification of Chloride Ions in Lysozyme at Long Wavelengths
    Other atoms: Cl (5);
  39. 9ggi (Na: 1) - Crystal Structure of Argininosuccinate Lyase From Arabidopsis Thaliana (Atasl)
    Other atoms: Cl (6);
  40. 9ghx (Na: 1) - Lysozyme Covalently Bound to Fac-[Re(Co)3-Imidazole] Complex, Incubated For 112 Weeks. Data Collection Done at Mammalian Body Temperature.
    Other atoms: Re (5); Cl (4);
Page generated: Sun Dec 15 11:44:25 2024

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