Sodium in PDB 8v6n: Open-State Cryo-Em Structure of Human TRPV3 in Presence of 2-Apb in CNW30 Nanodiscs

The binding sites of Sodium atom in the Open-State Cryo-Em Structure of Human TRPV3 in Presence of 2-Apb in CNW30 Nanodiscs (pdb code 8v6n). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Open-State Cryo-Em Structure of Human TRPV3 in Presence of 2-Apb in CNW30 Nanodiscs, PDB code: 8v6n:

Sodium binding site 1 out of 1 in the Open-State Cryo-Em Structure of Human TRPV3 in Presence of 2-Apb in CNW30 Nanodiscs


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Open-State Cryo-Em Structure of Human TRPV3 in Presence of 2-Apb in CNW30 Nanodiscs within 5.0Å range: probe atom residue distance (Å) B Occ A:Na910 b:12.2 occ:1.00 O A:HOH1043 4.0 5.4 1.0 O C:HOH1044 4.0 5.8 1.0 O B:HOH1044 4.0 4.4 1.0 O D:HOH1044 4.0 7.0 1.0 O A:HOH1042 4.2 6.2 1.0 O D:HOH1042 4.3 8.1 1.0 O C:HOH1042 4.3 12.0 1.0 O B:HOH1042 4.3 8.8 1.0 O C:HOH1031 4.4 5.2 1.0 O B:HOH1033 4.4 3.2 1.0 O A:HOH1033 4.5 3.5 1.0 O D:HOH1031 4.5 4.5 1.0

K.D.Nadezhdin, A.I.Sobolevsky. TRPV3 Activation By Different Agonists Accompanied By Lipid Dissociation From the Vanilloid Site To Be Published.