Sodium in PDB 8v1h: Crystal Structure of Human Pre-Mascrna

The structure of Crystal Structure of Human Pre-Mascrna, PDB code: 8v1h was solved by I.Skeparnias, J.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.83 / 2.89
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	44.986, 40.651, 123.393, 90, 96.99, 90
R / Rfree (%)	19.8 / 24.6

The binding sites of Sodium atom in the Crystal Structure of Human Pre-Mascrna (pdb code 8v1h). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Human Pre-Mascrna, PDB code: 8v1h:

Sodium binding site 1 out of 1 in the Crystal Structure of Human Pre-Mascrna


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Human Pre-Mascrna within 5.0Å range: probe atom residue distance (Å) B Occ A:Na101 b:77.5 occ:1.00 O6 A:G-2 4.1 94.0 1.0 O6 A:G-3 4.4 81.1 1.0 O4 A:U59 4.4 107.6 1.0 N4 A:C60 4.6 105.8 1.0 N7 A:G-3 4.8 75.9 1.0

I.Skeparnias, C.Bou-Nader, D.G.Anastasakis, L.Fan, Y.X.Wang, M.Hafner, J.Zhang. Structural Basis of MALAT1 Rna Maturation and Mascrna Biogenesis Nat.Struct.Mol.Biol. 2024.
ISSN: ESSN 1545-9985
DOI: 10.1038/S41594-024-01340-4