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Sodium in PDB 8uqu: Crystal Structure of N-Terminal Domain of Fic Family Protein From Bordetella Bronchiseptica

Protein crystallography data

The structure of Crystal Structure of N-Terminal Domain of Fic Family Protein From Bordetella Bronchiseptica, PDB code: 8uqu was solved by G.Minasov, L.Shuvalova, J.S.Brunzelle, O.Kiryukhina, K.J.F.Satchell, Center For Structural Biology Of Infectious Diseases (Csbid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.91 / 2.95
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 149.971, 149.971, 371.921, 90, 90, 120
R / Rfree (%) 17.8 / 20.7

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of N-Terminal Domain of Fic Family Protein From Bordetella Bronchiseptica (pdb code 8uqu). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of N-Terminal Domain of Fic Family Protein From Bordetella Bronchiseptica, PDB code: 8uqu:

Sodium binding site 1 out of 1 in 8uqu

Go back to Sodium Binding Sites List in 8uqu
Sodium binding site 1 out of 1 in the Crystal Structure of N-Terminal Domain of Fic Family Protein From Bordetella Bronchiseptica


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of N-Terminal Domain of Fic Family Protein From Bordetella Bronchiseptica within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na401

b:58.5
occ:1.00
O A:HOH503 2.5 76.9 1.0
OH6 A:1PE402 2.8 89.2 1.0
O A:THR104 2.8 66.7 1.0
OH4 A:1PE402 2.8 107.8 1.0
OH7 A:1PE402 2.9 83.1 1.0
OH3 A:1PE402 3.0 103.5 1.0
OH2 A:1PE402 3.4 88.4 1.0
OH5 A:1PE402 3.5 92.5 1.0
C23 A:1PE402 3.5 102.9 1.0
C16 A:1PE402 3.5 89.9 1.0
C22 A:1PE402 3.7 101.6 1.0
C26 A:1PE402 3.7 91.4 1.0
C13 A:1PE402 3.7 102.3 1.0
C15 A:1PE402 3.7 87.8 1.0
C25 A:1PE402 3.7 87.2 1.0
C14 A:1PE402 3.8 97.9 1.0
C24 A:1PE402 3.8 100.7 1.0
C12 A:1PE402 3.8 95.1 1.0
C A:THR104 4.0 65.3 1.0
CA A:THR104 4.6 65.2 1.0
CB A:THR104 4.7 69.6 1.0

Reference:

G.Minasov, L.Shuvalova, J.S.Brunzelle, O.Kiryukhina, K.J.F.Satchell. Crystal Structure of N-Terminal Domain of Fic Family Protein From Bordetella Bronchiseptica To Be Published.
Page generated: Wed Nov 13 13:09:40 2024

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