Sodium in PDB 8v2t: Phosphoheptose Isomerase Gmha From Burkholderia Pseudomallei Bound to Inhibitor MUT148591

The structure of Phosphoheptose Isomerase Gmha From Burkholderia Pseudomallei Bound to Inhibitor MUT148591, PDB code: 8v2t was solved by M.S.Junop, C.Brown, R.Szabla, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.06 / 1.40
Space group	P 42 21 2
Cell size a, b, c (Å), α, β, γ (°)	60.906, 60.906, 92.728, 90, 90, 90
R / Rfree (%)	15.7 / 16.3

The structure of Phosphoheptose Isomerase Gmha From Burkholderia Pseudomallei Bound to Inhibitor MUT148591 also contains other interesting chemical elements:

Fluorine	(F)	2 atoms
Chlorine	(Cl)	1 atom
Zinc	(Zn)	1 atom

The binding sites of Sodium atom in the Phosphoheptose Isomerase Gmha From Burkholderia Pseudomallei Bound to Inhibitor MUT148591 (pdb code 8v2t). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Phosphoheptose Isomerase Gmha From Burkholderia Pseudomallei Bound to Inhibitor MUT148591, PDB code: 8v2t:

Sodium binding site 1 out of 1 in the Phosphoheptose Isomerase Gmha From Burkholderia Pseudomallei Bound to Inhibitor MUT148591


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Phosphoheptose Isomerase Gmha From Burkholderia Pseudomallei Bound to Inhibitor MUT148591 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na204 b:33.9 occ:1.00 O A:HOH376 2.1 35.4 1.0 O A:HOH456 2.2 37.5 1.0 OD1 A:ASN114 2.3 18.8 1.0 O A:HOH422 2.3 23.8 1.0 O A:GLY113 2.4 18.2 1.0 HZ1 A:LYS141 3.1 38.9 1.0 HA A:ASN114 3.3 16.8 1.0 CG A:ASN114 3.4 14.6 1.0 C A:GLY113 3.5 14.1 1.0 NZ A:LYS141 3.9 32.4 1.0 CA A:ASN114 4.0 14.0 1.0 N A:ASN114 4.1 13.6 1.0 O A:HOH415 4.2 31.4 1.0 HZ3 A:LYS141 4.2 38.9 1.0 CB A:ASN114 4.3 13.5 1.0 HD21 A:ASN114 4.3 19.2 1.0 ND2 A:ASN114 4.3 16.0 1.0 O A:LEU112 4.3 14.3 1.0 HZ2 A:LYS141 4.4 38.9 1.0 C A:LEU112 4.4 13.0 1.0 HE2 A:LYS141 4.5 32.5 1.0 O A:ALA111 4.5 13.4 1.0 O A:HOH435 4.5 26.6 1.0 N A:GLY113 4.5 12.0 1.0 HE3 A:LYS141 4.6 32.5 1.0 HB3 A:ASN114 4.6 16.3 1.0 CA A:GLY113 4.6 13.5 1.0 CE A:LYS141 4.6 27.0 1.0 O A:HOH423 4.7 30.4 1.0 O A:GLN110 4.8 13.7 1.0 H A:GLY113 4.8 14.4 1.0 H A:ASN114 4.9 16.4 1.0 HA A:LEU112 5.0 14.0 1.0

M.S.Junop, C.Brown. Potentiating Activity of Gmha Inhibitors on Gram-Negative Bacteria To Be Published.