Sodium in PDB, part 287 (files: 11441-11480),
PDB 8rzk-8ss9
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 11441-11480 (PDB 8rzk-8ss9).
-
8rzk (Na: 4) - The Michaelis Complex of ZGGH129 D486N From Zobellia Galactanivorans with Neo-B/K-Oligo-Carrageenan Tetrasaccharide (Beta-Kappa Neo-Oligo- Carrageenan DP4).
Other atoms:
Cl (4);
-
8s38 (Na: 2) - Crystal Structure of Medicago Truncatula Glutamate Dehydrogenase 2 in Complex with Citrate and Nad
Other atoms:
Ca (3);
-
8s39 (Na: 2) - Crystal Structure of Medicago Truncatula Glutamate Dehydrogenase 2 in Complex with Isophthalic Acid and Nad
Other atoms:
Ca (3);
-
8s3a (Na: 8) - Crystal Structure of Medicago Truncatula Glutamate Dehydrogenase 2 in Complex with 2,6-Pyridinedicarboxylic Acid and Nad
-
8s3c (Na: 2) - Crystal Structure of Medicago Truncatula Glutamate Dehydrogenase 2 (Unliganded)
Other atoms:
Ca (3);
-
8s3d (Na: 3) - Crystal Structure of Medicago Truncatula Glutamate Dehydrogenase 2 in Complex with 2-Amino-2-Hydroxyglutarate (Reaction Intermediate) and Nad
Other atoms:
Ca (6);
-
8s46 (Na: 1) - Cdaa-E01 Complex
Other atoms:
Cl (1);
-
8s49 (Na: 2) - Cdaa-B06 Complex
Other atoms:
F (1);
-
8s4j (Na: 5) - Structure, Substrate Selectivity Determinants and Membrane Interactions of A Glutamate-Specific Taxi Trap Binding Protein From Vibrio Cholerae.
-
8s6e (Na: 1) - Monoclonal Antibody Menw Targeting Serogroup W of Neisseria Meningitidis
-
8s6j (Na: 3) - Navms in Complex with Riluzole
Other atoms:
F (3);
Cl (2);
-
8s9w (Na: 2) - Murine S100A7/S100A15 in Presence of Calcium
Other atoms:
Ca (4);
-
8sbf (Na: 3) - Full-Length Structure of the Lysr-Type Transcriptional Regulator, ACIAD0746, From Acinetobacter Baylyi
Other atoms:
Mg (4);
-
8sbm (Na: 1) - Crystal Structure of the Wild-Type Catalytic Atp-Binding Domain of Mtb Doss
Other atoms:
Zn (4);
-
8sf6 (Na: 13) - Promiscuous Amino Acid Gamma Synthase From Caldicellulosiruptor Hydrothermalis in Closed Conformation
-
8sfs (Na: 3) - High Affinity Nanobodies Against Gfp
Other atoms:
Cl (4);
-
8sfv (Na: 11) - High Affinity Nanobodies to Gfp
-
8sfx (Na: 19) - High Affinity Nanobodies Against Gfp
-
8sfz (Na: 2) - High Affinity Nanobodies Against Gfp
Other atoms:
K (3);
-
8sgb (Na: 1) - Crystal Structure of CD1D-Lipid Complexed with Beta-2-Microglobulin, Tcr Alpha-Chain and Tcr Beta-Chain
-
8sgd (Na: 13) - Crystal Structure of CDC3(G) - CDC10(Delta 1-10) Heterocomplex From Saccharomyces Cerevisiae
Other atoms:
Mg (2);
-
8sgi (Na: 3) - Cryo-Em Structure of Human NCX1 in Complex with SEA0400
Other atoms:
Ca (6);
F (2);
-
8sgj (Na: 3) - Cryo-Em Structure of Human NCX1 in Apo Inactivated State
Other atoms:
Ca (6);
-
8si2 (Na: 2) - Cryo-Em Structure of TRPM7 in MSP2N2 Nanodisc in Apo State
-
8sig (Na: 1) - Crystal Structure of PRMT4 with Compound YD1-288
-
8sjj (Na: 8) - X-Ray Structure of the Metastable SEPT14-SEPT7 Heterodimeric Coiled Coil
-
8skl (Na: 1) - PTP1B in Complex with 182
Other atoms:
F (1);
Cl (2);
-
8slc (Na: 1) - High Affinity Nanobodies Against Gfp
Other atoms:
Cl (4);
-
8slx (Na: 1) - Rat TRPV2 Bound with 1 Cbd Ligand in Nanodiscs
-
8sly (Na: 1) - Rat TRPV2 Bound with 2 Cbd Ligands in Nanodiscs
-
8sm7 (Na: 3) - Air-Oxidized G. Y4 Truffo Expressed From M9 Minimal Medium Supplemented with Fe
Other atoms:
Fe (8);
-
8smh (Na: 1) - Chimeric Ets-Domain of Murine Pu.1 Harboring the Corresponding Beta- Strand 3 (S3) Residues From Murine Ets-1 in Complex with D(Aataagcggaagtggg)
-
8sng (Na: 2) - Crystal Structure of Arnb Transferase From Klebsiella Aerogenes (Lattice Translocation Disorder, P21 Form)
Other atoms:
Mg (2);
-
8sp1 (Na: 1) - Chimeric Ets-Domain of Murine Pu.1 Harboring the Corresponding Beta- Strand 3 (S3) Residues From Murine Ets-1 in Complex with D(Aataagcgiaagtggg)
-
8srx (Na: 2) - Crystal Structure of Bak-Bax Heterodimer with Lysopc
Other atoms:
Cl (1);
Zn (1);
-
8ss5 (Na: 1) - Structure of Lbd-Tmd of Ampa Receptor GLUA2 in Complex with Auxiliary Subunit Tarp Gamma-5 (Apo State)
-
8ss6 (Na: 1) - Structure of Ampa Receptor GLUA2 Complex with Auxiliary Subunits Tarp Gamma-5 and Cornichon-2 Bound to Competitive Antagonist Zk, Channel Blocker Spermidine and Antiepileptic Drug Perampanel (Closed State)
Other atoms:
F (12);
-
8ss7 (Na: 1) - Structure of Ampa Receptor GLUA2 Complex with Auxiliary Subunits Tarp Gamma-5 and Cornichon-2 Bound to Competitive Antagonist Zk, Channel Blocker Spermidine and Antiepileptic Drug Perampanel (Closed State)
Other atoms:
F (12);
-
8ss8 (Na: 2) - Structure of Ampa Receptor GLUA2 Complex with Auxiliary Subunit Tarp Gamma-5 Bound to Competitive Antagonist Zk and Antiepileptic Drug Perampanel (Closed State)
Other atoms:
F (12);
-
8ss9 (Na: 2) - Structure of Lbd-Tmd of Ampa Receptor GLUA2 in Complex with Auxiliary Subunit Tarp Gamma-5 Bound to Competitive Antagonist Zk and Antiepileptic Drug Perampanel (Closed State)
Other atoms:
F (12);
Page generated: Wed Nov 13 13:08:58 2024
|
