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Sodium in PDB, part 287 (files: 11441-11480), PDB 8ru1-8sly

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 11441-11480 (PDB 8ru1-8sly).
  1. 8ru1 (Na: 7) - Chromatin Remodeling Regulator CECR2 with in Crystallo Disulfide Bond
  2. 8ru4 (Na: 2) - Crystal Structure of Human Catenin Beta-1 in Complex with Stitched Peptide Inhibitor
    Other atoms: Cl (1);
  3. 8ruk (Na: 4) - Structure of Oceanobacillus Iheyensis Group II Intron in the Presence of Na+, MG2+, and ARN25850
    Other atoms: Mg (10); Br (2);
  4. 8rus (Na: 1) - Hen Egg-White Lysozyme (Hewl) Structure From Euxfel Fxe, Multi-Hit Droplet-on-Demand (Dod) Injection, 9.3 Kev Photon Energy, Space Group P432121
    Other atoms: Cl (3);
  5. 8rvc (Na: 4) - Crystal Structure of Alpha Keto Acid C-Methyl-Transferases Mrsa Bound to Ketoarginine
    Other atoms: Mg (4);
  6. 8rvs (Na: 4) - Crystal Structure of Alpha Keto Acid C-Methyl-Transferases Mrsa Bound to Sam
    Other atoms: Mg (2);
  7. 8rwl (Na: 2) - Crystal Structure of Methanopyrus Kandleri Malate Dehydrogenase Mutant 1
    Other atoms: Cl (3);
  8. 8rwm (Na: 1) - Crystal Structure of Selenomethionine Derivatized Alpha Keto Acid C- Methyl-Transferases Mrsa
    Other atoms: Mg (3);
  9. 8ryz (Na: 1) - Structures of Selenoneine Synthase Sena From Variovorax Paradoxus
    Other atoms: Ni (1);
  10. 8rzk (Na: 4) - The Michaelis Complex of ZGGH129 D486N From Zobellia Galactanivorans with Neo-B/K-Oligo-Carrageenan Tetrasaccharide (Beta-Kappa Neo-Oligo- Carrageenan DP4).
    Other atoms: Cl (4);
  11. 8s38 (Na: 2) - Crystal Structure of Medicago Truncatula Glutamate Dehydrogenase 2 in Complex with Citrate and Nad
    Other atoms: Ca (3);
  12. 8s39 (Na: 2) - Crystal Structure of Medicago Truncatula Glutamate Dehydrogenase 2 in Complex with Isophthalic Acid and Nad
    Other atoms: Ca (3);
  13. 8s3a (Na: 8) - Crystal Structure of Medicago Truncatula Glutamate Dehydrogenase 2 in Complex with 2,6-Pyridinedicarboxylic Acid and Nad
  14. 8s3c (Na: 2) - Crystal Structure of Medicago Truncatula Glutamate Dehydrogenase 2 (Unliganded)
    Other atoms: Ca (3);
  15. 8s3d (Na: 3) - Crystal Structure of Medicago Truncatula Glutamate Dehydrogenase 2 in Complex with 2-Amino-2-Hydroxyglutarate (Reaction Intermediate) and Nad
    Other atoms: Ca (6);
  16. 8s46 (Na: 1) - Cdaa-E01 Complex
    Other atoms: Cl (1);
  17. 8s49 (Na: 2) - Cdaa-B06 Complex
    Other atoms: F (1);
  18. 8s4j (Na: 5) - Structure, Substrate Selectivity Determinants and Membrane Interactions of A Glutamate-Specific Taxi Trap Binding Protein From Vibrio Cholerae.
  19. 8s6e (Na: 1) - Monoclonal Antibody Menw Targeting Serogroup W of Neisseria Meningitidis
  20. 8s6j (Na: 3) - Navms in Complex with Riluzole
    Other atoms: F (3); Cl (2);
  21. 8s87 (Na: 2) - Kod-H4 Dna Polymerase Mutant - Apo Structure
    Other atoms: Mg (9);
  22. 8s9w (Na: 2) - Murine S100A7/S100A15 in Presence of Calcium
    Other atoms: Ca (4);
  23. 8sbf (Na: 3) - Full-Length Structure of the Lysr-Type Transcriptional Regulator, ACIAD0746, From Acinetobacter Baylyi
    Other atoms: Mg (4);
  24. 8sbm (Na: 1) - Crystal Structure of the Wild-Type Catalytic Atp-Binding Domain of Mtb Doss
    Other atoms: Zn (4);
  25. 8sf6 (Na: 13) - Promiscuous Amino Acid Gamma Synthase From Caldicellulosiruptor Hydrothermalis in Closed Conformation
  26. 8sfs (Na: 3) - High Affinity Nanobodies Against Gfp
    Other atoms: Cl (4);
  27. 8sfv (Na: 11) - High Affinity Nanobodies to Gfp
  28. 8sfx (Na: 19) - High Affinity Nanobodies Against Gfp
  29. 8sfz (Na: 2) - High Affinity Nanobodies Against Gfp
    Other atoms: K (3);
  30. 8sgb (Na: 1) - Crystal Structure of CD1D-Lipid Complexed with Beta-2-Microglobulin, Tcr Alpha-Chain and Tcr Beta-Chain
  31. 8sgd (Na: 13) - Crystal Structure of CDC3(G) - CDC10(Delta 1-10) Heterocomplex From Saccharomyces Cerevisiae
    Other atoms: Mg (2);
  32. 8sgi (Na: 3) - Cryo-Em Structure of Human NCX1 in Complex with SEA0400
    Other atoms: Ca (6); F (2);
  33. 8sgj (Na: 3) - Cryo-Em Structure of Human NCX1 in Apo Inactivated State
    Other atoms: Ca (6);
  34. 8si2 (Na: 2) - Cryo-Em Structure of TRPM7 in MSP2N2 Nanodisc in Apo State
  35. 8sig (Na: 1) - Crystal Structure of PRMT4 with Compound YD1-288
  36. 8sjj (Na: 8) - X-Ray Structure of the Metastable SEPT14-SEPT7 Heterodimeric Coiled Coil
  37. 8skl (Na: 1) - PTP1B in Complex with 182
    Other atoms: F (1); Cl (2);
  38. 8slc (Na: 1) - High Affinity Nanobodies Against Gfp
    Other atoms: Cl (4);
  39. 8slx (Na: 1) - Rat TRPV2 Bound with 1 Cbd Ligand in Nanodiscs
  40. 8sly (Na: 1) - Rat TRPV2 Bound with 2 Cbd Ligands in Nanodiscs
Page generated: Sun Dec 15 11:43:40 2024

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