Sodium in PDB 8ok3: Structure of the C-Terminal Domain of the Bdellovibrio Bacteriovorus BD2133 Fibre

The structure of Structure of the C-Terminal Domain of the Bdellovibrio Bacteriovorus BD2133 Fibre, PDB code: 8ok3 was solved by S.G.Caulton, A.L.Lovering, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.75 / 1.50
Space group	P 21 3
Cell size a, b, c (Å), α, β, γ (°)	68.76, 68.76, 68.76, 90, 90, 90
R / Rfree (%)	15 / 15.9

The structure of Structure of the C-Terminal Domain of the Bdellovibrio Bacteriovorus BD2133 Fibre also contains other interesting chemical elements:

Chlorine

(Cl)

2 atoms

The binding sites of Sodium atom in the Structure of the C-Terminal Domain of the Bdellovibrio Bacteriovorus BD2133 Fibre (pdb code 8ok3). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of the C-Terminal Domain of the Bdellovibrio Bacteriovorus BD2133 Fibre, PDB code: 8ok3:

Sodium binding site 1 out of 1 in the Structure of the C-Terminal Domain of the Bdellovibrio Bacteriovorus BD2133 Fibre


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of the C-Terminal Domain of the Bdellovibrio Bacteriovorus BD2133 Fibre within 5.0Å range: probe atom residue distance (Å) B Occ A:Na1102 b:12.1 occ:0.33 O A:TYR993 2.2 12.1 1.0 CL A:CL1104 2.5 12.2 0.3 C A:TYR993 3.3 12.1 1.0 N A:TYR993 3.7 11.3 1.0 CA A:TYR993 4.1 11.0 1.0 N A:ASN994 4.4 11.3 1.0 CD1 A:TYR993 4.5 11.3 1.0 CA A:ASN994 4.5 10.5 1.0 CB A:ASN994 4.5 10.9 1.0 CG A:TYR993 4.5 11.1 1.0 CE1 A:TYR993 4.8 12.6 1.0 C A:GLY992 4.9 12.9 1.0 CB A:TYR993 4.9 10.7 1.0 CD2 A:TYR993 5.0 12.0 1.0

S.G.Caulton, A.L.Lovering. Structure of the C-Terminal Domain of the Bdellovibrio Bacteriovorus BD2133 Fibre To Be Published.