Sodium in PDB 8og2: Crystal Structure of Crebbp Histone Acetyltransferase Domain in Complex with Coenzyme A

Enzymatic activity of Crystal Structure of Crebbp Histone Acetyltransferase Domain in Complex with Coenzyme A

All present enzymatic activity of Crystal Structure of Crebbp Histone Acetyltransferase Domain in Complex with Coenzyme A:
2.3.1.48;

Protein crystallography data

The structure of Crystal Structure of Crebbp Histone Acetyltransferase Domain in Complex with Coenzyme A, PDB code: 8og2 was solved by A.E.Mechaly, W.Zhang, A.Haouz, M.Green, F.Rodrigues-Lima, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	77.66 / 2.47
*Space group*	I 2 2 2
*Cell size a, b, c (Å), α, β, γ (°)*	86.766, 145.69, 155.312, 90, 90, 90
*R / R_free (%)*	23.6 / 28.9

Other elements in 8og2:

The structure of Crystal Structure of Crebbp Histone Acetyltransferase Domain in Complex with Coenzyme A also contains other interesting chemical elements:

Zinc

(Zn)

4 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Crebbp Histone Acetyltransferase Domain in Complex with Coenzyme A (pdb code 8og2). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Crebbp Histone Acetyltransferase Domain in Complex with Coenzyme A, PDB code: 8og2:

Sodium binding site 1 out of 1 in 8og2

Go back to

Sodium Binding Sites List in 8og2

Sodium binding site 1 out of 1 in the Crystal Structure of Crebbp Histone Acetyltransferase Domain in Complex with Coenzyme A

Mono view

Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Crebbp Histone Acetyltransferase Domain in Complex with Coenzyme A within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Na1807 b:41.9 occ:1.00	O	A:HOH1915	2.3	58.9	1.0
	O	A:ASN1168	2.4	75.6	1.0
	O	A:LEU1166	2.6	75.4	1.0
	O	A:TRP1165	3.1	64.5	1.0
	C	A:ASN1168	3.5	67.7	1.0
	C	A:LEU1166	3.7	71.8	1.0
	CA	A:ARG1169	4.0	70.8	1.0
	N	A:ARG1169	4.2	62.4	1.0
	CA	A:LEU1166	4.2	53.0	1.0
	C	A:TRP1165	4.2	51.8	1.0
	CG	A:LYS1170	4.3	73.2	1.0
	N	A:LYS1170	4.3	75.5	1.0
	C	A:ARG1169	4.3	63.3	1.0
	CE2	A:TYR1175	4.4	57.0	1.0
	N	A:ASN1168	4.5	61.7	1.0
	C	A:TYR1167	4.6	67.3	1.0
	CA	A:ASN1168	4.7	58.4	1.0
	O	A:TYR1167	4.7	88.4	1.0
	N	A:LEU1166	4.7	44.2	1.0
	CD2	A:TYR1175	4.7	57.1	1.0
	N	A:TYR1167	4.8	70.0	1.0

Reference:

A.E.Mechaly, W.Zhang, A.Haouz, M.Green, F.Rodrigues-Lima. Crystal Structure of Crebbp Histone Acetyltransferase Domain in Complex with Coenzyme A To Be Published.

Page generated: Wed Oct 9 12:45:09 2024

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