Sodium in PDB 8oyl: Coiled-Coil Domain of Human Stil, Q729L Mutant

The structure of Coiled-Coil Domain of Human Stil, Q729L Mutant, PDB code: 8oyl was solved by F.J.O.Martin, M.Shamir, D.N.Woolfson, A.Friedler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	31.46 / 1.92
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	24.974, 34.942, 72.321, 90, 90, 90
R / Rfree (%)	14.9 / 19

The structure of Coiled-Coil Domain of Human Stil, Q729L Mutant also contains other interesting chemical elements:

Chlorine	(Cl)	3 atoms
Cadmium	(Cd)	2 atoms

The binding sites of Sodium atom in the Coiled-Coil Domain of Human Stil, Q729L Mutant (pdb code 8oyl). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Coiled-Coil Domain of Human Stil, Q729L Mutant, PDB code: 8oyl:

Sodium binding site 1 out of 1 in the Coiled-Coil Domain of Human Stil, Q729L Mutant


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Coiled-Coil Domain of Human Stil, Q729L Mutant within 5.0Å range: probe atom residue distance (Å) B Occ A:Na101 b:17.3 occ:0.50 N A:SER2 3.0 20.0 1.0 OG A:SER2 3.1 18.5 1.0 CB A:SER2 3.4 18.4 1.0 CB A:ALA5 3.7 16.8 1.0 CA A:LEU1 3.8 24.6 1.0 CA A:SER2 3.8 18.2 1.0 C A:LEU1 3.9 21.8 1.0 CD2 A:LEU1 4.2 27.3 1.0 CB A:LEU1 4.6 26.1 1.0 O A:HOH207 4.8 52.4 1.0 O A:SER2 4.9 17.6 1.0 C A:SER2 4.9 17.7 1.0 N A:LEU1 4.9 26.7 1.0

M.Shamir, F.J.O.Martin, D.N.Woolfson, A.Friedler. Molecular Mechanism of Stil Coiled-Coil Domain Oligomerization Int J Mol Sci 2023.
ISSN: ESSN 1422-0067
DOI: 10.3390/IJMS241914616