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Sodium in PDB, part 254 (files: 10121-10160), PDB 7pfi-7q77

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 10121-10160 (PDB 7pfi-7q77).
  1. 7pfi (Na: 1) - 20 Minute FE2+ Soaked Structure of Synftn Variant D65A
    Other atoms: Fe (3); Cl (1);
  2. 7pfj (Na: 2) - 20 Minute FE2+ Soaked Structure of Synftn Variant E141A
    Other atoms: Cl (2); Fe (3);
  3. 7pfl (Na: 1) - The Sars-COV2 Major Protease (Mpro) Apo Structure to 1.8 A Resolution
  4. 7pfr (Na: 2) - Crystal Structure of Two-Domain Laccase Mutant M199A From Streptomyces Griseoflavus
    Other atoms: Cu (24);
  5. 7pg6 (Na: 1) - Crystal Structure of PI3KALPHA in Complex with the Inhibitor Nvp- BYL719
    Other atoms: F (3);
  6. 7pgi (Na: 4) - NAVAB1P (Bicelles)
    Other atoms: Mg (1);
  7. 7phx (Na: 1) - Tsetse Thrombin Inhibitor in Complex with Human Alpha-Thrombin - Acid- Stable Sulfotyrosine Analogue
  8. 7phz (Na: 2) - Crystal Structure of X77 Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2 in Spacegroup P2(1)2(1)2(1).
    Other atoms: Cl (2);
  9. 7pi0 (Na: 2) - Unstacked Compact Dunaliella Psii
    Other atoms: Ca (2); Fe (4); Mg (202); Mn (8); Cl (4);
  10. 7po6 (Na: 1) - Xist (M6A)Ucg Tetraloop Rna Bound to the Yth Domain of YTHDC1
  11. 7pob (Na: 1) - An Irreversible, Promiscuous and Highly Thermostable Claisen- Condensation Biocatalyst Drives the Synthesis of Substituted Pyrroles
  12. 7pqs (Na: 1) - SRPK1 in Complex with MSC2711186
    Other atoms: F (2); Cl (4);
  13. 7pu0 (Na: 2) - Crystal Structure of Two-Domain Laccase Mutant H165A/M199G From Streptomyces Griseoflavus
    Other atoms: Cu (24);
  14. 7puf (Na: 2) - Urate Oxidase Azaxanthine Complex Under 600 Bar (60 Mpa) of Argon
    Other atoms: Ar (4);
  15. 7pux (Na: 1) - Structure of P97 N-D1(L198W) in Complex with Fragment TROLL2
    Other atoms: Br (1);
  16. 7pv5 (Na: 16) - Rbd Domain of D. Melanogaster Trna (Uracil-5-)-Methyltransferase Homolog A (TRMT2A)
    Other atoms: Cl (46); Au (4);
  17. 7pvj (Na: 1) - Crystal Structure of Thioredoxin Reductase From Brugia Malayi in Complex with Auranofin
    Other atoms: Au (1);
  18. 7pvs (Na: 1) - Crystal Structure of the Abl SH3 Domain V73E-A74S-S75R-G76T-D77E-G92N- Y93N-N94T-H95E Mutant in Presence of Peg 200
  19. 7pw1 (Na: 4) - Crystal Structure of Ancestral Haloalkane Dehalogenase Anclinb-Dmba
    Other atoms: Cl (1);
  20. 7pwn (Na: 2) - Urate Oxydase Aza-Xanthine Complex at 1000 Bars (100 Mpa) of Argon
    Other atoms: Ar (4);
  21. 7q09 (Na: 2) - Urate Oxidase Aza-Xanthine Complex Under 1500 Bar of Argon
    Other atoms: Ar (6);
  22. 7q0e (Na: 4) - Human Carbonic Anhydrase II in Complex with Methyl 2- (Benzenesulfonyl)-4-Chloro-5-Sulfamoylbenzoate
    Other atoms: Zn (1); Cl (1);
  23. 7q0t (Na: 1) - Lysozyme Soaked with V(IV)OSO4
    Other atoms: Cl (4); V (3);
  24. 7q0u (Na: 1) - Lysozyme Soaked with V(IV)OSO4 and Bipy
    Other atoms: Cl (5); V (1);
  25. 7q0v (Na: 1) - Lysozyme Soaked with V(IV)OSO4 and Phen
    Other atoms: V (4); Cl (6);
  26. 7q1d (Na: 3) - Acetyltrasferase(3) Type Iiia in Complex with 3-N-Methyl-Nemycin B
    Other atoms: Cl (1);
  27. 7q1k (Na: 1) - Crystal Structure of the Native AA9A Lpmo From Thermoascus Aurantiacus
    Other atoms: Cu (1);
  28. 7q1n (Na: 2) - Crystal Structure of Human Butyrylcholinesterase in Complex with N- [(2R)-3-[(Cyclohexylmethyl)Amino]-2-Hydroxypropyl]-2,2- Diphenylacetamide
    Other atoms: Cl (13);
  29. 7q1o (Na: 1) - Crystal Structure of Human Butyrylcholinesterase in Complex with N- [(2S)-3-[(Cyclohexylmethyl)Amino]-2-Hydroxypropyl]-3,3- Diphenylpropanamide
    Other atoms: Cl (1);
  30. 7q1p (Na: 1) - Crystal Structure of Human Butyrylcholinesterase in Complex with N- [(2R)-3-[(Cyclohexylmethyl)Amino]-2-Hydroxypropyl]-3,3- Diphenylpropanamide
    Other atoms: Cl (8);
  31. 7q1r (Na: 1) - A De Novo Designed Homo-Dimeric Antiparallel Coiled Coil Apcc-Di
  32. 7q36 (Na: 1) - Crystal Structure of KR2 Sodium Pump Rhodopsin Pressurized with Krypton
    Other atoms: Kr (11);
  33. 7q3z (Na: 2) - Dna/Rna Binding Protein
    Other atoms: Zn (2);
  34. 7q47 (Na: 2) - Endolysin From Bacteriophage ENC34, Catalytic Domain
  35. 7q5e (Na: 1) - Crystal Structure of F2F-2020209-00X Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2.
    Other atoms: Cl (2);
  36. 7q5f (Na: 1) - Crystal Structure of F2F-2020216-01X Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2.
    Other atoms: Cl (6);
  37. 7q6q (Na: 2) - KEAP1 Compound Complex
    Other atoms: Cl (2);
  38. 7q75 (Na: 1) - Room Temperature Structure of Rnase A at Atmospheric Pressure
    Other atoms: Cl (3);
  39. 7q76 (Na: 1) - Room Temperature Structure of Rnase A at 22 Mpa Helium Gas Pressure in A Sapphire Capillary
    Other atoms: Cl (3);
  40. 7q77 (Na: 1) - Room Temperature Structure of Rnase A at 50 Mpa Helium Gas Pressure in A Sapphire Capillary
    Other atoms: Cl (3);
Page generated: Sun Dec 15 11:42:14 2024

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