Sodium in PDB 7mim: Mouse TRPV3 in CNW11 Nanodiscs, Closed State at 4 Degrees Celsius

The binding sites of Sodium atom in the Mouse TRPV3 in CNW11 Nanodiscs, Closed State at 4 Degrees Celsius (pdb code 7mim). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 4 binding sites of Sodium where determined in the Mouse TRPV3 in CNW11 Nanodiscs, Closed State at 4 Degrees Celsius, PDB code: 7mim:
Jump to Sodium binding site number: 1; 2; 3; 4;

Sodium binding site 1 out of 4 in the Mouse TRPV3 in CNW11 Nanodiscs, Closed State at 4 Degrees Celsius


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Mouse TRPV3 in CNW11 Nanodiscs, Closed State at 4 Degrees Celsius within 5.0Å range:

Sodium binding site 2 out of 4 in the Mouse TRPV3 in CNW11 Nanodiscs, Closed State at 4 Degrees Celsius


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Mouse TRPV3 in CNW11 Nanodiscs, Closed State at 4 Degrees Celsius within 5.0Å range: probe atom residue distance (Å) B Occ A:Na911 b:58.0 occ:1.00 O D:GLY638 2.5 63.7 1.0 O A:GLY638 2.5 66.2 1.0 O C:GLY638 2.5 66.7 1.0 O B:GLY638 2.5 68.2 1.0 C C:GLY638 3.6 66.7 1.0 C A:GLY638 3.6 66.2 1.0 C B:GLY638 3.6 68.2 1.0 C D:GLY638 3.6 63.7 1.0 CA B:GLY638 4.2 68.2 1.0 CA C:GLY638 4.2 66.7 1.0 CA A:GLY638 4.2 66.2 1.0 CA D:GLY638 4.2 63.7 1.0 N A:LEU639 4.7 65.3 1.0 N D:LEU639 4.7 63.1 1.0 N B:LEU639 4.7 66.8 1.0 N C:LEU639 4.7 65.9 1.0

Sodium binding site 3 out of 4 in the Mouse TRPV3 in CNW11 Nanodiscs, Closed State at 4 Degrees Celsius


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 3 of Mouse TRPV3 in CNW11 Nanodiscs, Closed State at 4 Degrees Celsius within 5.0Å range: probe atom residue distance (Å) B Occ A:Na912 b:58.0 occ:1.00 CD1 C:ILE674 4.5 66.5 1.0 CD1 A:ILE674 4.5 66.8 1.0 CD1 B:ILE674 4.5 67.6 1.0 CD1 D:ILE674 4.5 64.0 1.0

Sodium binding site 4 out of 4 in the Mouse TRPV3 in CNW11 Nanodiscs, Closed State at 4 Degrees Celsius


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 4 of Mouse TRPV3 in CNW11 Nanodiscs, Closed State at 4 Degrees Celsius within 5.0Å range:

K.D.Nadezhdin, A.Neuberger, Y.A.Trofimov, N.A.Krylov, V.Sinica, N.Kupko, V.Vlachova, E.Zakharian, R.G.Efremov, A.I.Sobolevsky. Structural Mechanism of Heat-Induced Opening of A Temperature-Sensitive Trp Channel. Nat.Struct.Mol.Biol. 2021.
ISSN: ESSN 1545-9985
PubMed: 34239124
DOI: 10.1038/S41594-021-00615-4