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Sodium in PDB, part 145 (files: 5761-5800), PDB 5fhy-5g3b

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 5761-5800 (PDB 5fhy-5g3b).
  1. 5fhy (Na: 3) - Crystal Structure of Flid (HAP2) From Pseudomonas Aeruginosa PAO1
  2. 5fie (Na: 1) - Crystal Structure of N-Terminal Domain of Shaft Pilin Spaa From Lactobacillus Rhamnosus Gg
  3. 5fj1 (Na: 3) - Structure of the Standard Kink Turn Hmkt-7 As Stem Loop in P212121 Space Group
    Other atoms: Mg (21);
  4. 5fjc (Na: 1) - Sam-I Riboswitch Bearing the H. Marismortui Kt-7 Variant C-2BU
    Other atoms: Mg (2); K (4); Ba (21);
  5. 5fje (Na: 2) - Cu(I)-CSP1 (Copper Storage Protein 1) From Methylosinus Trichosporium OB3B
    Other atoms: Cu (26);
  6. 5fk1 (Na: 3) - Sam-I Riboswitch Bearing the H. Marismortui Kt-7 Variant 3BN Is Ug
    Other atoms: Ba (12);
  7. 5fke (Na: 2) - Sam-I Riboswitch Bearing the H. Marismortui Kt-7 Variant 3BN Is Gu
    Other atoms: Ba (16); K (1);
  8. 5fkf (Na: 2) - Sam-I Riboswitch Bearing the H. Marismortui Kt-7 Variant 3BN Is Uc
    Other atoms: K (2); Ba (12);
  9. 5fkg (Na: 4) - Sam-I Riboswitch Bearing the H. Marismortui Kt-7 Variant 3BN Is Cg
    Other atoms: K (2); Ba (13);
  10. 5fkh (Na: 2) - Sam-I Riboswitch Bearing the H. Marismortui Kt-7 Variant 3BN Is Cu
    Other atoms: K (1); Ba (12);
  11. 5flr (Na: 1) - Native State Mass Spectrometry, Surface Plasmon Resonance and X-Ray Crystallography Correlate Strongly As A Fragment Screening Combination
    Other atoms: Zn (1);
  12. 5fnk (Na: 2) - Native State Mass Spectrometry, Surface Plasmon Resonance and X-Ray Crystallography Correlate Strongly As A Fragment Screening Combination
    Other atoms: Cl (2); Zn (1);
  13. 5fob (Na: 2) - Crystal Structure of Human Complement C3B in Complex with Smallpox Inhibitor of Complement (Spice)
    Other atoms: I (7); Cl (5);
  14. 5fok (Na: 3) - Crystal Structure of the Siderophore Receptor Piua From Pseudomonas Aeruginosa
  15. 5foz (Na: 1) - De Novo Structure of the Binary Mosquito Larvicide Binab at pH 10
  16. 5fq6 (Na: 4) - Crystal Structure of the Suscd Complex BT2261-2264 From Bacteroides Thetaiotaomicron
    Other atoms: Ca (4);
  17. 5fq7 (Na: 6) - Crystal Structure of the Suscd Complex BT2261-2264 From Bacteroides Thetaiotaomicron
    Other atoms: Mg (2);
  18. 5fq9 (Na: 1) - Crystal Structure of the OXA10 with 1C
    Other atoms: Cl (1);
  19. 5fqu (Na: 2) - Orthorhombic Crystal Structure of of Plpd (Selenomethionine Derivative)
  20. 5frc (Na: 1) - Structure of Urate Oxidase Prepared By the 'Soak-and-Freeze' Method Under 42 Bar of Oxygen Pressure
  21. 5fs5 (Na: 1) - Breaking Down the Wall: Mutation of the Tyrosine Gate of the Universal Escherichia Coli Fimbrial Adhesin Fimh
  22. 5fst (Na: 1) - Structure of Lysozyme Prepared By the 'Soak-and-Freeze' Method Under 100 Bar of Krypton Pressure
    Other atoms: Kr (5); Cl (8);
  23. 5ftt (Na: 4) - Octameric Complex of Latrophilin 3 (Lec, Olf) , UNC5D (Ig, IG2, TSP1) and FLRT2 (Lrr)
    Other atoms: Ca (4);
  24. 5ftu (Na: 6) - Tetrameric Complex of Latrophilin 3, UNC5D and FLRT2
    Other atoms: Ca (6);
  25. 5fu2 (Na: 3) - The Complexity of the Ruminococcus Flavefaciens Cellulosome Reflects An Expansion in Glycan Recognition
    Other atoms: Ca (1);
  26. 5fu3 (Na: 1) - The Complexity of the Ruminococcus Flavefaciens Cellulosome Reflects An Expansion in Glycan Recognition
  27. 5fub (Na: 2) - Crystal Structure of Zebrafish Protein Arginine Methyltransferase 2 Catalytic Domain with Sah
    Other atoms: Cl (1);
  28. 5fun (Na: 1) - Crystal Structure of Human JARID1B in Complex with GSK467
    Other atoms: Mn (1); Zn (2);
  29. 5fus (Na: 1) - Crystal Structure of B. Cenocepacia Dfsa
  30. 5fv6 (Na: 3) - KPFLO11 Presents A Novel Member of the FLO11 Family with A Unique Recognition Pattern For Homophilic Interactions
  31. 5fva (Na: 5) - Toscana Virus Nucleocapsid Protein
  32. 5fyz (Na: 1) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with 3D Fragment 2-(2-Oxo-2,3-Dihydro-1H-Indol-3-Yl)Acetonitrile (N10063A)
    Other atoms: Mn (1); Zn (2);
  33. 5g01 (Na: 1) - An Unusual Natural Product Primary Sulfonamide: Synthesis, Carbonic Anhydrase Inhibition and Protein X-Ray Structure of Psammaplin C
    Other atoms: Br (2); Zn (1);
  34. 5g0c (Na: 3) - An Unusual Natural Product Primary Sulfonamide: Synthesis, Carbonic Anhydrase Inhibition and Protein X-Ray Structure of Psammaplin C
    Other atoms: Zn (1);
  35. 5g0g (Na: 2) - Crystal Structure of Danio Rerio HDAC6 CD1 in Complex with Trichostatin A
    Other atoms: Cl (5); Zn (1);
  36. 5g0r (Na: 3) - Methyl-Coenzyme M Reductase I From Methanothermobacter Marburgensis Exposed to 3-Nitrooxypropanol
    Other atoms: Ni (2); Mg (18); K (1); Cl (3);
  37. 5g27 (Na: 1) - Structure of Spin-Labelled T4 Lysozyme Mutant L118C-R1 at Room Temperature
    Other atoms: Cl (1);
  38. 5g2h (Na: 1) - S. Enterica Hisa with Mutation L169R
  39. 5g2i (Na: 1) - S. Enterica Hisa Mutant DUP13-15(Vvr)
  40. 5g3b (Na: 1) - Preserving Metallic Sites Affected By Radiation Damage: the CUT2 Case in Thermus Thermophilus Multicopper Oxidase
    Other atoms: Cu (3);
Page generated: Tue Dec 1 10:42:53 2020

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