Sodium in PDB 5foz: De Novo Structure of the Binary Mosquito Larvicide Binab at pH 10

The structure of De Novo Structure of the Binary Mosquito Larvicide Binab at pH 10, PDB code: 5foz was solved by J.P.Colletier, M.R.Sawaya, M.Gingery, J.A.Rodriguez, D.Cascio, A.S.Brewster, T.Michels-Clark, S.Boutet, G.J.Williams, M.Messerschmidt, D.P.Deponte, R.G.Sierra, H.Laksmono, J.E.Koglin, M.S.Hunter, H.W Park, M.Uervirojnangkoorn, D.L.Bideshi, A.T.Brunger, B.A.Federici, N.K.Sauter, D.S.Eisenberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.05 / 2.40
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	86.670, 97.286, 127.654, 90.00, 90.00, 90.00
R / Rfree (%)	16.5 / 21.1

The binding sites of Sodium atom in the De Novo Structure of the Binary Mosquito Larvicide Binab at pH 10 (pdb code 5foz). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the De Novo Structure of the Binary Mosquito Larvicide Binab at pH 10, PDB code: 5foz:

Sodium binding site 1 out of 1 in the De Novo Structure of the Binary Mosquito Larvicide Binab at pH 10


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of De Novo Structure of the Binary Mosquito Larvicide Binab at pH 10 within 5.0Å range: probe atom residue distance (Å) B Occ B:Na1000 b:71.2 occ:1.00 OE2 B:GLU65 3.6 0.7 1.0 CD B:GLU65 4.5 0.4 1.0 CG B:GLU65 4.5 96.9 1.0

J.Colletier, M.R.Sawaya, M.Gingery, J.A.Rodriguez, D.Cascio, A.S.Brewster, T.Michels-Clark, R.H.Hice, N.Coquelle, S.Boutet, G.J.Williams, M.Messerschmidt, D.P.Deponte, R.G.Sierra, H.Laksmono, J.E.Koglin, M.S.Hunter, H.Park, M.Uervirojnangkoorn, D.K.Bideshi, A.T.Brunger, B.A.Federici, N.K.Sauter, D.S.Eisenberg. De Novo Phasing with X-Ray Laser Reveals Mosquito Larvicide Binab Structure. Nature V. 539 43 2016.
ISSN: ISSN 0028-0836
PubMed: 27680699
DOI: 10.1038/NATURE19825