Sodium in PDB 5fv6: KPFLO11 Presents A Novel Member of the FLO11 Family with A Unique Recognition Pattern For Homophilic Interactions

The structure of KPFLO11 Presents A Novel Member of the FLO11 Family with A Unique Recognition Pattern For Homophilic Interactions, PDB code: 5fv6 was solved by T.Kraushaar, S.Brueckner, M.Mikolaiski, F.Schreiner, M.Veelders, H.U.Moesch, L.O.Essen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.00 / 2.00
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	37.440, 58.680, 85.270, 90.00, 96.56, 90.00
R / Rfree (%)	22.28 / 26.673

The binding sites of Sodium atom in the KPFLO11 Presents A Novel Member of the FLO11 Family with A Unique Recognition Pattern For Homophilic Interactions (pdb code 5fv6). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 3 binding sites of Sodium where determined in the KPFLO11 Presents A Novel Member of the FLO11 Family with A Unique Recognition Pattern For Homophilic Interactions, PDB code: 5fv6:
Jump to Sodium binding site number: 1; 2; 3;

Sodium binding site 1 out of 3 in the KPFLO11 Presents A Novel Member of the FLO11 Family with A Unique Recognition Pattern For Homophilic Interactions


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of KPFLO11 Presents A Novel Member of the FLO11 Family with A Unique Recognition Pattern For Homophilic Interactions within 5.0Å range: probe atom residue distance (Å) B Occ A:Na1195 b:37.5 occ:1.00 O A:HOH2106 2.0 48.7 1.0 O A:HOH2108 2.3 26.7 1.0 O A:HOH2103 2.6 22.1 1.0 N A:ASP109 3.7 21.4 1.0 CA A:ILE108 4.0 23.7 1.0 OD2 A:ASP109 4.2 24.6 1.0 CG A:ASP109 4.2 21.0 1.0 CB A:ASP109 4.3 18.9 1.0 C A:ILE108 4.3 21.3 1.0 CB A:TRP114 4.4 19.6 1.0 CB A:ILE108 4.5 24.3 1.0 O A:ASP107 4.6 25.0 1.0 CA A:ASP109 4.6 19.0 1.0 CG2 A:ILE108 4.7 26.9 1.0 OD1 A:ASP109 4.7 20.4 1.0 CA A:TRP114 4.8 19.9 1.0 O A:LYS113 4.8 20.3 1.0

Sodium binding site 2 out of 3 in the KPFLO11 Presents A Novel Member of the FLO11 Family with A Unique Recognition Pattern For Homophilic Interactions


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of KPFLO11 Presents A Novel Member of the FLO11 Family with A Unique Recognition Pattern For Homophilic Interactions within 5.0Å range: probe atom residue distance (Å) B Occ A:Na1196 b:39.7 occ:1.00 O A:HOH2160 2.5 23.4 1.0 O B:HOH2001 3.4 33.0 1.0 N B:VAL16 3.7 26.7 1.0 CB B:VAL16 4.1 23.2 1.0 CG2 B:VAL16 4.2 22.4 1.0 CA B:VAL16 4.5 24.6 1.0 O B:VAL16 4.5 22.4 1.0

Sodium binding site 3 out of 3 in the KPFLO11 Presents A Novel Member of the FLO11 Family with A Unique Recognition Pattern For Homophilic Interactions


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 3 of KPFLO11 Presents A Novel Member of the FLO11 Family with A Unique Recognition Pattern For Homophilic Interactions within 5.0Å range: probe atom residue distance (Å) B Occ B:Na1195 b:34.6 occ:1.00 O B:HOH2141 2.1 36.9 1.0 O B:HOH2136 2.4 22.6 1.0 ND1 B:HIS179 4.0 21.9 1.0 CE1 B:HIS179 4.1 22.1 1.0 O B:HOH2026 4.2 29.9 1.0 O B:HOH2021 4.2 37.7 1.0 O B:HIS178 4.2 19.0 1.0 CD1 B:TRP42 4.3 24.8 1.0 CG B:TRP42 4.6 25.3 1.0 NE1 B:TRP42 4.7 24.8 1.0 O B:HOH2017 4.8 32.0 1.0 CB B:TRP42 4.8 25.2 1.0 O B:HOH2033 4.9 30.6 1.0

T.Kraushaar, S.Brueckner, M.Veelders, D.Rhinow, F.Schreiner, R.Birke, A.Pagenstecher, H.U.Moesch, L.O.Essen. Interactions By the Fungal FLO11 Adhesin Depend on A Fibronectin Type III-Like Adhesin Domain Girdled By Aromatic Bands To Be Published.